Query= MSMg01no231_k23.b1 MSMg01no231_k23.b1 CHROMAT_FILE:
MSMg01no231_k23.b1 PHD_FILE: MSMg01no231_k23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:48:02 2005
(319 letters)
>mm_chr7_141532373_141533091
Length = 719
Score = 543 bits (281), Expect = e-159
Identities = 305/313 (97%)
Strand = Plus / Minus
Query: 5 gaattcacagtgggactcaataccactctgtagttattagtcttaggcgtggtctgagct 64
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 517 gaattcacagtgggactcaataccattctgtagttattagtcttaggcgtggtctgagct 458
Query: 65 gtttgctggaaatcagattaaacacaatcctgggaggacaaaatggtgttgtgatgagat 124
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 457 gtttgctggaaatcagattaaacacaatcctgggagaacaaaatggtattgtgatgagat 398
Query: 125 atgtaacgaaaagtgttttgggtacagatgatctggaaaatggaaaaatcaaaaactcga 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ctgtaacgaaaagtgttttgggtacagatgatctggaaaatggaaaaatcaaaaactcga 338
Query: 185 gaaataggatcacgtatctcagtcctgtgtcttggtcgagtttttctttctcccggtaac 244
||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 337 gaaataggatcacgtatctcagtcctgtgtcttggtcaagtttttctttctcccagtaac 278
Query: 245 cttagagtaaatctaagacctttggataagatgtgatcctttctggtttgcccaccaact 304
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 277 cttagagtaaatctaagacctttgggtaagatgtgatcctttctggtttgcccaccaact 218
Query: 305 ttggagagcagaa 317
|||||||| ||||
Sbjct: 217 ttggagagtagaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no231_k23.g1 MSMg01no231_k23.g1 CHROMAT_FILE:
MSMg01no231_k23.g1 PHD_FILE: MSMg01no231_k23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:48:02 2005
(288 letters)
>mm_chr7_141412354_141413041
Length = 688
Score = 501 bits (259), Expect = e-146
Identities = 284/299 (94%), Gaps = 11/299 (3%)
Strand = Plus / Plus
Query: 1 cttattgaaaacaaaaggcacat-----------aactagcaatcaaagatgggatgggg 49
||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 190 cttattgaaaacaaagggcacatgacttctaccaaactagcaatcaaagatgggatgggg 249
Query: 50 accacatgtaaggagagagactagaatgctggccatacatgcatatataggtatatgcac 109
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aacacatgtaaggagagagactagaatgctggccatacatgcatatataggtatatgcac 309
Query: 110 accgtatatgccctatcatatccatacactcagaagtgtgtgtgtgagagagagagagag 169
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 310 accgtatatgccctatcatatccatacactcagaagtgtgtgtgtgtgtgagagagagag 369
Query: 170 tgaatatgtaagtgtgaaagagagaggagcgaggaggagagagggagaggaagcaaacag 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tgaatatgtaagtgtgaaagagagaggagcgaggaggagagagggagaggaagcaaacag 429
Query: 230 aaaggaaggaggaatggagggacaaaaagggagaaggaggacgggaaggacagaaggag 288
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 aaaggaaggaggaatggagggacaaaaagggagaaggaggacgggaaggacagaaggag 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
