Query= MSMg01no233_j10.b1 MSMg01no233_j10.b1 CHROMAT_FILE:
MSMg01no233_j10.b1 PHD_FILE: MSMg01no233_j10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:19 2005
(223 letters)
>mm_chr7_63228679_63229301
Length = 623
Score = 400 bits (207), Expect = e-116
Identities = 219/223 (98%)
Strand = Plus / Plus
Query: 1 acacagactcagctagaaatgttactttattttaaaacatatacagactcctaaatatta 60
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 201 acacagactcagctagaaatgttactttattttaaaacatatacagaataataaatatta 260
Query: 61 ttgtaaaacttaagagccttttttatctacataaggcaattataacatgctatgactacc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgtaaaacttaagagccttttttatctacataaggcaattataacatgctatgactact 320
Query: 121 tctatgaaggaaaatataagcaagtcttagacactgatagatatgtgtgtactaactgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctatgaaggaaaatataagcaagtcttagacactgatagatatgtgtgtactaactgga 380
Query: 181 aacatctcccccactacatttatgtgaaaaagcttttacagaa 223
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacatctcccccactacatttatgtgaaaaagcttttacagaa 423
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 223
Length of database: 623
Length adjustment: 9
Effective length of query: 214
Effective length of database: 614
Effective search space: 131396
Effective search space used: 131396
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no233_j10.g1 MSMg01no233_j10.g1 CHROMAT_FILE:
MSMg01no233_j10.g1 PHD_FILE: MSMg01no233_j10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:19 2005
(301 letters)
>mm_chr7_63348537_63349237
Length = 701
Score = 563 bits (291), Expect = e-165
Identities = 297/299 (99%), Gaps = 1/299 (0%)
Strand = Plus / Minus
Query: 1 tagacaagtaagaataagattggtggctcttgagcaagaaaaccccaaactgacctttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 tagacaagtaagaataagattggtggctcttgagcaagaaaaccccaaactgacctttgt 571
Query: 61 tctctacacaaggcagagatggagacaagacagacagacagacacacacacacacaaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tctctacacaaggcagagatggagacaagacagacagacagacacacacacacacaaaca 511
Query: 121 cacacacacacttttttaaaaaacatacagaaacacagagcaagctctctgaaacataac 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 cacacacacac-tttttaaaaaacatacagaaacacagagcaagctctctgaaacataac 452
Query: 181 acagtacttcagcatgcctttgaaagctaaaattaaacccctcattttaatatgaatatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 acagtacttcagcatgcctttgaaagctaaaattaaacccctcattttaatatgaatatt 392
Query: 241 gcccactttagaaaggaatttttatttatctttgcagtcccaggtattatacctattgt 299
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 391 gcccactttagaaaggaatttttatttatctttgcagtcccaggtattaaacctattgt 333
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 301
Length of database: 701
Length adjustment: 9
Effective length of query: 292
Effective length of database: 692
Effective search space: 202064
Effective search space used: 202064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
