CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTGAGTTGTTCTAGAGTTCATTTTAATACAAAATTAACTGTGAG
AGAAGAAATGCATCTGGTTCTTACTACCTATGCAATAAATATTACTTTTT
AAAATATACTTTTCAATAAAGTATATTTACTTGTTTGTAGAATCCCAAGG
ATAGCTAAAGAAGATATGTAAATAATAGAGCAGTAAATTGTGTATAAAAT
TTTTTGATATTTAATTTCACCGTTTTCAAAAGAATTCCTCAACAATTCCA
TTGCCAGTGGTCTGTGTATATGCATGTGTATGTGCAAGGGGAAGGGCTAC
AGAGAGCAAGAGGGTATCTTTTTTTTCTCTTTTTTTTTTTACTAGATATT
TTCTTTATTTGCATTTCAAATGCTATCCCAAAAGTTCCGTATACCCTCCC
CGCCCCCCCCTGCCTTGCTCCCCTACCCACCCACTCCCACTTCTTGGCCC
TGGTGTTCCCCTGTACTGGGGCATATAAAGTTTGATAGACCAAGGGGCCT
CTCTTCCCAATGATGGCCGACTAGGCCATCTTCTACTACATATGCAACTA
GAGACACAGCTCTGGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCTA
TAGGGTTGCAGACCCCTTCAGCTCCTTGGGTACTTTCTCTAGCTTCTCCA
TTGGGGGCCCTGTGTTCCATCCTATAGATGACTG

CGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTTTCAGATAACTCCTAGGTTGTGT
TAAGTTGACATAGAACTAGACACATCCCCACTTAACAGCTTTCATGGTAC
TTTCTGGAAAAATGGGGGTTCAACTAGAGGGAAGAGACCTTCAGGTCAGA
TCCAGCTCCAATTGTCTGAGTTCTGTGTACCAAGTACAAAGCATCATCAG
CCATAGGGGCCCACCCTCAACCTCTGAAACACAACAAAAGATTAAGTTAA
TAATGTATCTTGTTCTGGGAATCTCTTGGAGTACCCTAAATAACCATTCA
AAATTAGGCTTCCTGTGTCTGGTCCCACCATCCTTTGTTAGTCTAGGGTT
CTTGTAGGGAACATTGTCAGCCCAACTGGCATAACTTACACACACACACA
CACACACACACACACACACACACACACACACACACACACACACACACACA
CACACACACACGTGTGTGTGTGTTTATATATATATATATATATATATATA
TAATGCGTGCATGTATGTATGCTTATGACCGCTAGCGTATATGCGGCATC
CGCATTTCTTCGCCTAGAGTTCGATTCTGTGAACCTTTCATTCTTTCCCA
TCCCATGTCCCTTGAAACCCGCCCCCTTTTTCGTCCTATCTCCTGCCGCC
ACTTCCACGCCAGATTATTTTTTTGATGG

Query= MSMg01no234_a13.b1 MSMg01no234_a13.b1 CHROMAT_FILE:
MSMg01no234_a13.b1 PHD_FILE: MSMg01no234_a13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:53 2005
         (685 letters)



>mm_chr7_70096706_70097790
          Length = 1085

 Score = 1232 bits (637), Expect = 0.0
 Identities = 671/685 (97%), Gaps = 6/685 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctttgagttgttctagagttcattttaatacaaaattaactgtgagagaagaaa 63
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctttgagttgttttagagttcattttaatacaaaattaactgtgagagaagaaa 263

                                                                       
Query: 64  tgcatctggttcttactacctatgcaataaatattactttttaaaatatacttttcaata 123
           |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgcatctggttcatactaactatgcaataaatattactttttaaaatatacttttcaata 323

                                                                       
Query: 124 aagtatatttacttgtttgtagaatcccaaggatagctaaagaagatatgtaaataatag 183
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aagtatatttacttctttgtagaatcccaaggatagctaaagaagatatgtaaataatag 383

                                                                       
Query: 184 agcagtaaattgtgtataaaattttttgatatttaatttcaccgttttcaaaagaattcc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agcagtaaattgtgtataaaattttttgatatttaatttcaccgttttcaaaagaattcc 443

                                                                       
Query: 244 tcaacaattccattgccagtggtctgtgtatatgcatgtgtatgtgcaaggggaagggct 303
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcaacaattccattgccagtggtatgtgtatatgcatgtgtatgtgcaaggggaagggct 503

                                                                       
Query: 304 acagagagcaagagggtatcttttttttctctttttttttttactagatattttctttat 363
           |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||
Sbjct: 504 acagagagcaagagggtatcttttttttctctttttttt---actagatattttctttat 560

                                                                       
Query: 364 ttgcatttcaaatgctatcccaaaagttccgtataccctccccgcccccc---cctgcct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||   ||  |||
Sbjct: 561 ttgcatttcaaatgctatcccaaaagttccgtataccctccccgccccccacccccacct 620

                                                                       
Query: 421 tgctcccctacccacccactcccacttcttggccctggtgttcccctgtactggggcata 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgctcccctacccacccactcccacttcttggccctggtgttcccctgtactggggcata 680

                                                                       
Query: 481 taaagtttgatagaccaaggggcctctcttcccaatgatggccgactaggccatcttcta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 681 taaagtttgatagaccaaggggcctctcttcccaatgatggccgactaggccatcttctg 740

                                                                       
Query: 541 ctacatatgcaactagagacacagctctggggggtactggttagttcatattgttgttcc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctacatatgcaactagagacacagctctggggggtactggttagttcatattgttgttcc 800

                                                                       
Query: 601 acctatagggttgcagaccccttcagctccttgggtactttctctagcttctccattggg 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 acctatagggttgcagaccccttcagctccttgggtactttctctagcttctccattggg 860

                                    
Query: 661 ggccctgtgttccatcctatagatg 685
           |||||||||||||||||||||||||
Sbjct: 861 ggccctgtgttccatcctatagatg 885


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space:   725625
Effective search space used:   725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)