Query= MSMg01no262_d06.b1 MSMg01no262_d06.b1 CHROMAT_FILE:
MSMg01no262_d06.b1 PHD_FILE: MSMg01no262_d06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:47 2005
(300 letters)
>mm_chr7_57755379_57756077
Length = 699
Score = 516 bits (267), Expect = e-151
Identities = 291/299 (97%), Gaps = 1/299 (0%)
Strand = Plus / Plus
Query: 2 tacttcttatctcattctatgttgctatgaagtatctgagaccaagagccttgcaaagga 61
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tacttcttatctcattctatgctgctatgaagtatctgagaccaagagccttgcaaagga 261
Query: 62 aagaaatgtccatacagcctaattatagtggcttgaaagtctaaacagcatgattctggt 121
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aagaaatgtccatacggcctaattatagtggcttgaaagtctaaacagcatgattctggt 321
Query: 122 attgagtgtgagcttttgggctatttaacaacacgattgaaacacagcaaaaagaagtga 181
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 322 attgagtgtgagcttttgggctatttaacaacacaattgaaacacagcaaaa-gaagtga 380
Query: 182 gtgtagacagaagtggcatatgcagaggcctcattttatgataacccattaccttagttt 241
||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 gtgtatacagaagtggcatatgcagaggcctcgttttatgataacccattaccttagtta 440
Query: 242 ctagtcttatctgagagatataattcacttctgagataaaggcattaatccctctcaag 300
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctagtcttacctgagagatataattcacttctgagataaaggcattaatccctctcaag 499
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 300
Length of database: 699
Length adjustment: 9
Effective length of query: 291
Effective length of database: 690
Effective search space: 200790
Effective search space used: 200790
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no262_d06.g1 MSMg01no262_d06.g1 CHROMAT_FILE:
MSMg01no262_d06.g1 PHD_FILE: MSMg01no262_d06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:47 2005
(224 letters)
>mm_chr7_57596122_57596745
Length = 624
Score = 427 bits (221), Expect = e-124
Identities = 221/221 (100%)
Strand = Plus / Plus
Query: 4 agaaggtaggaggcagcacaaggaggggattggggcttcagagaaagaaggaagcctaga 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 agaaggtaggaggcagcacaaggaggggattggggcttcagagaaagaaggaagcctaga 263
Query: 64 gttgaagaggaagcattcttagagaagagatggaaagagaggaagaaaacttagagtttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gttgaagaggaagcattcttagagaagagatggaaagagaggaagaaaacttagagtttt 323
Query: 124 ctgtgtaattctgaaaagcaggtagactcacgaggccccatgcatgtgactttgtaagct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctgtgtaattctgaaaagcaggtagactcacgaggccccatgcatgtgactttgtaagct 383
Query: 184 cctgcactaggggtagggatggtggagaggaaaggtatatg 224
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cctgcactaggggtagggatggtggagaggaaaggtatatg 424
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 224
Length of database: 624
Length adjustment: 9
Effective length of query: 215
Effective length of database: 615
Effective search space: 132225
Effective search space used: 132225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
