Query= MSMg01no263_g09.b1 MSMg01no263_g09.b1 CHROMAT_FILE:
MSMg01no263_g09.b1 PHD_FILE: MSMg01no263_g09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:18 2005
(246 letters)
>mm_chr7_106234099_106234744
Length = 646
Score = 429 bits (222), Expect = e-125
Identities = 240/246 (97%)
Strand = Plus / Minus
Query: 1 gaactataaacatggggcgatgacaaagcctctgaagtcatgtgtgacaccccctggcaa 60
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 446 gaactataaacatggggcgatgacaaagcctctgaagtcatgtgagacacaggctggcaa 387
Query: 61 catgctgtgcagtagagaaggactgagtagcccaggctggagaagaagcaggcagtggtg 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 catgctgttcagtagagaaggactgagtagcccaggctggagaagaagcaggcagtggtg 327
Query: 121 tgaccaagaagcagtagagcacgtgctgctgggtctggggcccagcgtctctgctttctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tgaccaagaagcagtagagcacgtgctgctgggtctggggcccagcgtctctgctttctt 267
Query: 181 ctctcccatctcggtaaactgtaggcttggctggtcctgttgctttgttttttaaggaga 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 266 ctctcccatctcggtaaactgtgggcttggctggtcctgttgctttgttttttaaggaga 207
Query: 241 tgcagt 246
||||||
Sbjct: 206 tgcagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no263_g09.g1 MSMg01no263_g09.g1 CHROMAT_FILE:
MSMg01no263_g09.g1 PHD_FILE: MSMg01no263_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:18 2005
(639 letters)
>mm_chr7_106106246_106107277
Length = 1032
Score = 1201 bits (621), Expect = 0.0
Identities = 632/639 (98%), Gaps = 7/639 (1%)
Strand = Plus / Plus
Query: 1 tctggaatatgaaattattacatttctttgaaaaactagatgtgtccaacactactcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctggaatatgaaattattacatttctttgaaaaactagatgtgtccaacactactcttg 260
Query: 61 agaattctaaaaactatgtttaaattgaatatgactactttatctcagtacttcgaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaattctaaaaactatgtttaaattgaatatgactactttatctcagtacttcgaaaaa 320
Query: 121 aggataacagctatatctcactgcctgtgcggtcggcagagagtggagtagtttacattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggataacagctatatctcactgcctgtgcggtcggcagagagtggagtagtttacattg 380
Query: 181 ggccaggcataactaagtttttcttctcccttccctcatccctctctaaattagacccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggccaggcataactaagtttttcttctcccttccctcatccctctctaaattagacccaa 440
Query: 241 agtttggaaggcagggagccaggggagagtgcacaacaacctaacccagcatggtaaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtttggaaggcagggagccaggggagagtgcacaacaacctaacccagcatggtaaagt 500
Query: 301 caataacaaaattaagagtgtctgggtgcgagggcaggagaaaatccccaggaaaaagtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caataacaaaattaagagtgtctgggtgcgagggcaggagaaaatccccaggaaaaagtg 560
Query: 361 actaatagaaatgtctagcagagcaggagtcagccccgcctcccgcagctcccccagact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actaatagaaatgtctagcagagcaggagtcagccccgcctcccgcagctcccccagact 620
Query: 421 tctttcctgccccccccccccccaggacttaattctggccgcggctggcagggcatctca 480
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctttcctgccccccccccccc-aggacttaattctggccgcggctggcagggcatctca 679
Query: 481 gattccggtcctccttgtctgaggcctgctgcaagtgtctgtcctgacgcctttacagat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gattccggtcctccttgtctgaggcctgctgcaagtgtctgtcctgacgcctttacagat 739
Query: 541 ccaagcctctcttgcactgcgaagcgcacgcacaccctggggcagcaggaatgcgcgtga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 740 ccaagcctctcttgcactgcgaagcgcacgcacaccctggggcagcaggaatg------a 793
Query: 601 ggctttgcttgacactcgcatgctacctcagctgcctgg 639
|||||||||||||||||||||||||||||||||||||||
Sbjct: 794 ggctttgcttgacactcgcatgctacctcagctgcctgg 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1032
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1022
Effective search space: 642838
Effective search space used: 642838
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
