Query= MSMg01no264_g18.b1 MSMg01no264_g18.b1 CHROMAT_FILE:
MSMg01no264_g18.b1 PHD_FILE: MSMg01no264_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:35 2005
(312 letters)
>mm_chr7_148365785_148366497
Length = 713
Score = 497 bits (257), Expect = e-145
Identities = 299/319 (93%), Gaps = 16/319 (5%)
Strand = Plus / Minus
Query: 4 ggaattcactacatagcccaggttggcc-tgtactcccaaatgctgggaaggaacaagtg 62
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 338 ggaattcactacatagcccaggttggccttgtactcccaaatgctgggaaggaacaagtg 279
Query: 63 tgtgctgtcatgctcagctctttcaagattgagactgtcagccaactacggaagatctga 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tgtgctgtcatgctcagctctttcaagattgagactgtcagccaactacggaagatctga 219
Query: 123 cgtgttggggaggtgaattataaaaagattttatt----tatttattgt-ttgtttgttt 177
||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||
Sbjct: 218 cgtgttggggaggtgaattataaaaagattttattcatttatttatt-tattgtttgttt 160
Query: 178 gtttgtttgtt-tgactgtttgtctgcatgtatatatttgtaccaaatgtacgcttggtc 236
||||||||| | ||||||||||||||||||| ||||||||||||||||| || |||||||
Sbjct: 159 gtttgtttgatatgactgtttgtctgcatgtgtatatttgtaccaaatgcacacttggtc 100
Query: 237 cccacagaggccagaagagggtgtcagatcccatg----tttttggagttaggggcagct 292
||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 99 cccacagaggccagaagagggtgtcagatcccatggaact----ggagttaggggcagct 44
Query: 293 gtgaaccatcatgtgagtt 311
|||||||||||||||||||
Sbjct: 43 gtgaaccatcatgtgagtt 25
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 713
Length adjustment: 9
Effective length of query: 303
Effective length of database: 704
Effective search space: 213312
Effective search space used: 213312
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no264_g18.g1 MSMg01no264_g18.g1 CHROMAT_FILE:
MSMg01no264_g18.g1 PHD_FILE: MSMg01no264_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:35 2005
(242 letters)
>mm_chr7_148199041_148199682
Length = 642
Score = 437 bits (226), Expect = e-127
Identities = 238/242 (98%)
Strand = Plus / Plus
Query: 1 ctaatggtggatttgcaggagcccattgtcttggtgtagcctgggcacagggtttctctg 60
||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 ctaatggtggatttgcaggagtccattgtcttggtgtagcctgagcacagggtttctctg 260
Query: 61 ctctcctctcaggaggagacattgttttgtttactctctagcattagatagggaacaacc 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctcttctcaggaggagacattgttttgtttactctctagcattagatagggaacaacc 320
Query: 121 tggagtcttctgccacccagcgaaccactcaaccttgccctgcaggccaccaacactatg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 tggagtcttctgccacccagcgaaccactcaaccttgccctgcaggccaccaacacaatg 380
Query: 181 ggaagttataatgacttccattgttcctgctccaattacacatttggtgagtgggaagcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaagttataatgacttccattgttcctgctccaattacacatttggtgagtgggaagcg 440
Query: 241 ag 242
||
Sbjct: 441 ag 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
