Query= MSMg01no264_o01.b1 MSMg01no264_o01.b1 CHROMAT_FILE:
MSMg01no264_o01.b1 PHD_FILE: MSMg01no264_o01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:11 2005
(668 letters)
>mm_chr7_25307783_25308851
Length = 1069
Score = 1137 bits (588), Expect = 0.0
Identities = 653/684 (95%), Gaps = 18/684 (2%)
Strand = Plus / Minus
Query: 1 cagttttggagggaattttccttatattcaataagcttacttgaattcacgctcctatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 699 cagttttggagggaattttccttatattcaataagcttacttgaattcaagctcctacgg 640
Query: 61 ataagaagtattgggcttccaaccaccacagcctcacccccaagtgacagtgtgtaggat 120
||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 639 ataagaaatattgggcttccaaccacaacagcctcacccccaagtgacagtgtgtaggat 580
Query: 121 gcaggttccgcatgtgtcaagagcagtctttagctgtgttgacttggggttttagcgaga 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 579 gcaggttccgcatgtgtcaagagcagtctttagctgtgttgtcttggggttttagcgaga 520
Query: 181 gaccacccattccagaggctcaatgatgctggggctttctgcaagctgtgctaggcttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 519 gaccacccattccagaggctcaatgatgctggggctttctgcaagctgtgccaggcttcc 460
Query: 241 ttcctctatttctgagcttgaggtgagtacaggctaggagaaggacattatacttgcctg 300
|||||| | |||||||||||||||||||||||||||||||| ||||| | |||||||||
Sbjct: 459 ttcctccagttctgagcttgaggtgagtacaggctaggagagggacaagagacttgcctg 400
Query: 301 cttgaatgtgagagcagaggttaaggactcaaggtggtcatggcaaccactg-gaactgg 359
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 399 cttgaatgtgagagcagaggttaaggactcaaggtggtcatggcaaccactgcg-actgg 341
Query: 360 ggcactccacctctccagcaacattagaactccagcacttctctgtactgagtacaaa-g 418
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 340 ggcactccacctctccagcaacattagaactccagcacttctctgtactgagtacaaatg 281
Query: 419 ccacttgcagcccctggggtggaagcatgagccaactggcagtgtcttcagcagctgcaa 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ccacttgcagcccctggggtggaagcatgagccaactggcagtgtcttcagcagctgcaa 221
Query: 479 aggacttgtccccgcccca---------------agtcacccctacagtaggacagatac 523
||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 220 aggacttgtccccgccccaaattcctgctatcccagtcacccctacagtaggacagatac 161
Query: 524 gtttttgtcttttaagaccgagattctccatttagccctggctgtcctagaacttgctct 583
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 gtttttgttttttaagaccgagattctccatttagccctggctgtcctagaacttgctct 101
Query: 584 gtagaccaggctggccttaaactcaggatatccgcctacctctgtctctcaaagggctgg 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 gtagaccaggctggccttaaactcaggatatccgcctacctctgtctctcaaagggctgg 41
Query: 644 gattaaaggtatgtgacatcacta 667
||||||||||||||||||||||||
Sbjct: 40 gattaaaggtatgtgacatcacta 17
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1069
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1059
Effective search space: 696822
Effective search space used: 696822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no264_o01.g1 MSMg01no264_o01.g1 CHROMAT_FILE:
MSMg01no264_o01.g1 PHD_FILE: MSMg01no264_o01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:11 2005
(232 letters)
>mm_chr7_25170797_25171426
Length = 630
Score = 418 bits (216), Expect = e-121
Identities = 228/232 (98%), Gaps = 2/232 (0%)
Strand = Plus / Plus
Query: 1 aggcagacaggcatcaagatccttattctgccctctacttgctgtgtgccctggaaaagt 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 aggcagacaggcatcaagatccttattctgccctctacttgctgtgtgacctggaaaagt 260
Query: 61 ggctgcccttctctgaacattttacttcacctgtgagatgtcgtgtctccatggaactgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggctgcccttctctgaacattttacttcacctgtgagatgtcgtgtctccatggaactgc 320
Query: 121 tgtgatggtgtaaggaaacagtgccacggggcagggggcagaggggggggtcgtgtcagg 180
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 321 tgtgatggtgtaaggaaacagtgccacggggcagggggcggaggggggg-tcgtgtcagg 379
Query: 181 gttagtattgtcccgagcgtgagggatcatnttggtccagtgttaatcattt 232
|||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 380 gttagtattgtcccgagcgtgagggatcat-ttggtccagtgttaatcattt 430
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 630
Length adjustment: 9
Effective length of query: 223
Effective length of database: 621
Effective search space: 138483
Effective search space used: 138483
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
