Query= MSMg01no265_o02.b1 MSMg01no265_o02.b1 CHROMAT_FILE:
MSMg01no265_o02.b1 PHD_FILE: MSMg01no265_o02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:31 2005
(276 letters)
>mm_chr7_86444860_86445535
Length = 676
Score = 482 bits (249), Expect = e-140
Identities = 270/277 (97%), Gaps = 2/277 (0%)
Strand = Plus / Plus
Query: 1 attctgaaca-acaagctccttctaacttgaacatgacaaatcatttggaaccaagggat 59
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctgaacacacaagctccttctaacttgaacatgacaaatcatttggaaccaagggat 260
Query: 60 cctgttcctcttagatttgggtttttgtgtttttgtttttttgtttttttttacccattg 119
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 cctgttcctcttagatttgtgtttttgtgtttttgtttttttg-ttttttttacccattg 319
Query: 120 tcttccttctggttagagtctggtcctgtcatttgtatcaaactgttctcacatagtttt 179
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 320 tcttccttctggttagagtctggtcgtgtcatttgtagcaaactgttctcacatagtttt 379
Query: 180 gtccttgtgtgacactcagcacccctcagatatgtcctgctatcagatcctctcaataac 239
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 380 gtccgtgtgtgacactcagcacccctcagatatgtcctgccatcagatcctctcaataac 439
Query: 240 ttggaagccaaactcatttttttcctgtcatttttaa 276
|||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttggaagccaaactcatttttttcctgtcatttttaa 476
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 676
Length adjustment: 9
Effective length of query: 267
Effective length of database: 667
Effective search space: 178089
Effective search space used: 178089
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no265_o02.g1 MSMg01no265_o02.g1 CHROMAT_FILE:
MSMg01no265_o02.g1 PHD_FILE: MSMg01no265_o02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:31 2005
(279 letters)
>mm_chr7_86600867_86601545
Length = 679
Score = 509 bits (263), Expect = e-148
Identities = 275/279 (98%)
Strand = Plus / Minus
Query: 1 agggctgagccaacctctagttctggtgagcaagacacctacctgcttgccctctctggg 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 479 agggctgagccaacctctagttctggtgagcaagacacctacctgcttgggctctctggg 420
Query: 61 tgggtagtggacagttgggacttcccaccagagttcactaggttttgggagacttggaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tgggtagtggacagttgggacttcccaccagagttcactaggttttgggagacttggaga 360
Query: 121 tgctgccctattcccctgtggttcttaactgtaggggaccaaggagggatcctgtgacca 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 359 tgctgccctattcccctgtggttcttaactgtaggggaccaaggagggaacctgtgacca 300
Query: 181 tgctctcctgtcactttgcaatttgcctgctcagtttcaggccctttccccacccccacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tgctctcctgtcactttgcaatttgcctgctcagtttcaggccctttccccacccccacc 240
Query: 241 tcccctacccgttggcccttgctgaatgcaggtgctgga 279
||||||||||| |||||||||||||||||||||||||||
Sbjct: 239 tcccctacccgctggcccttgctgaatgcaggtgctgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
