CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAATAAGTACTCTCCAATGCATAGAACCACAGAACTTAAATATAGA
GTAAAGGAATGGGGGAAGGTTGGACCACCCTAGGAAGGGAAGGCAAAATA
GCTAATTACAGATGAAGGGAAGCAAGTGCTAGAAGTGAAGGATCAAATGG
CAAGATGACAGAAACAAGGTGAGATAGGGAATACAGGGATTGACAGCTAA
AACTAAAAGCTATTCACTGTTTTTAAAAGTGCATGCATGTGTATACTAAT
CCACATAGTGTTTATGCAGCAGTACATATTCATACATAAAATGAATGAAA
TGTTTTTCCAGGTCATAGAACCCTAGTCAGTAAAGATGAAATAGAAATAT
AGTGCTAATTATGCAGTAAGATCAGTTCTTTATACGTCTGTCCATTTGTG
CAGAAAAAAATACAGGAAGAGCAGAGAAAATTCTAATGATAACAGGAATT
TTATAGTGCACCTTGGATGAGCTATGTGTAAAAAAAATGCCAAGTAATAT
AGATGAAATGAGACAGTGATACTTTTCAGAATACACTGTATTGTTTAATT
CTAAATTTGAAACCACACTGTGATTTTCACAGTCAAAGAGGCAAATCAGA
AAAGTCAACACTATTCGTCAAAACTTCTAAGTGGTATACAAACATAAACA
AGTGAACCCAATCATCTGTAAGTCATATTTCTATTATAAACTTATCTCAC
TGTTGCT

ACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCCAAGGAATACCGAAAGGCT
GAGAAACATCTGAAAAAATGTTCAACATCCTTAATCATCAGAGAAATGCA
AATCAAAACAACCCTGAGATTCCATCTCACACCAGTCAGAATGGCTAAGA
TCAAAAATTCAGGTGATAGCAGATGCTGGTGAGGATGTGGAGAAAGAGAA
ACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAA
ATCAGTCTGGTGGTTCCTCCGAAAATTGGACATAGTACTACCGGAGGATC
CCGCAATACCTCTCCTGGGTTTTATATCCAGAAGATGTCCCAACCGTTAA
GAAGGACACATGCTCCACTATGCTCATAGCAGCCTTATTTAATAGCCAGA
AGCTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATGGATACAAAAAGT
GTGGTACATTTACACAATGGAGTAATACTCAACTATTAAAAAGAATGAAT
TCACGAAATTCCTAGGCAAATGGTTGGACCTGGAGGGCATCATCCTGAGT
GAGGTAACCCAATCACAAAAGAACTCAAATGAAATGTACTCACTGATAAG
TGGATATTAACCCAGAAACTTAGTATAGTGAGATATAAGGTACAATATGT
AAAACGTATGAAACTGAAGAAGAACGAAGACCAAAGTGTGGACACTTTGC
TCATTCTTAGAA

Query= MSMg01no266_h20.b1 MSMg01no266_h20.b1 CHROMAT_FILE:
MSMg01no266_h20.b1 PHD_FILE: MSMg01no266_h20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:17 2005
         (712 letters)



>mm_chr7_100806113_100807224
          Length = 1112

 Score = 1315 bits (680), Expect = 0.0
 Identities = 701/708 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaataagtactctccaatgcatagaaccacagaacttaaatatagagtaaaggaa 64
           ||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||| 
Sbjct: 806 gaattcaataagtacactacaatgcatagaaccacagaacttaaatattgagtaaaggat 747

                                                                       
Query: 65  tgggggaaggttggaccaccctaggaagggaaggcaaaatagctaattacagatgaaggg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 tgggggaaggttggaccaccctaggaagggaaggcaaaatagctaattacagatgaaggg 687

                                                                       
Query: 125 aagcaagtgctagaagtgaaggatcaaatggcaagatgacagaaacaaggtgagataggg 184
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 686 aagcaagtgctagaagtgaaggatcaaatggcaagatgacagaaacagggtgagataggg 627

                                                                       
Query: 185 aatacagggattgacagctaaaactaaaagctattcactgtttttaaaagtgcatgcatg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 aatacagggattgacagctaaaactaaaagctattcactgtttttaaaagtgcatgcatg 567

                                                                       
Query: 245 tgtatactaatccacatagtgtttatgcagcagtacatattcatacataaaatgaatgaa 304
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 566 tgtatactaatccacatagtgtttatgcagcagtacatattcatacataaaacgaatgaa 507

                                                                       
Query: 305 atgtttttccaggtcatagaaccctagtcagtaaagatgaaatagaaatatagtgctaat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 atgtttttccaggtcatagaaccctagtcagtaaagatgaaatagaaatatagtgctaat 447

                                                                       
Query: 365 tatgcagtaagatcagttctttatacgtctgtccatttgtgcagaaaaaaatacaggaag 424
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tatgcagtaagattagttctttatacgtctgtccatttgtgcagaaaaaaatacaggaag 387

                                                                       
Query: 425 agcagagaaaattctaatgataacaggaattttatagtgcaccttggatgagctatgtgt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 agcagagaaaattctaatgataacaggaattttatagtgcaccttggatgagctatgtgt 327

                                                                       
Query: 485 aaaaaaaatgccaagtaatatagatgaaatgagacagtgatacttttcagaatacactgt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aaaaaaaatgccaagtaatatagatgaaatgagacagtgatacttttcagaatacactgt 267

                                                                       
Query: 545 attgtttaattctaaatttgaaaccacactgtgattttcacagtcaaagaggcaaatcag 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 attgtttaattctaaatttgaaaccacactgtgattttcacagtcaaagaggcaaatcag 207

                                                                       
Query: 605 aaaagtcaacactattcgtcaaaacttctaagtggtatacaaacataaacaagtgaaccc 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aaaagtcaacactattcgtcaaaacttctaagtggtatacaaacataaacaagtgaaccc 147

                                                           
Query: 665 aatcatctgtaagtcatatttctattataaacttatctcactgttgct 712
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 aatcatctgtaagtcatatttctattataaacttatctcactgttgct 99


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 712
Length of database: 1112
Length adjustment: 10
Effective length of query: 702
Effective length of database: 1102
Effective search space:   773604
Effective search space used:   773604
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)