Query= MSMg01no266_n13.b1 MSMg01no266_n13.b1 CHROMAT_FILE:
MSMg01no266_n13.b1 PHD_FILE: MSMg01no266_n13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:44 2005
(611 letters)
>mm_chr7_69536306_69537315
Length = 1010
Score = 1120 bits (579), Expect = 0.0
Identities = 600/607 (98%), Gaps = 1/607 (0%)
Strand = Plus / Minus
Query: 5 gaattctttccctgtagcccttggtcatacttttaaagcctctttttgtcactcacagtg 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 gaattctttccctg-agcccttggtcatacttttaaagcctctttttgtcactcacagtg 752
Query: 65 attggtgacttgcctccatctattatcttaaagtgtcaaatcttcaggcaaacaaaagga 124
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 attggtgacttgcctagatctattatcttaaagtgtcaaatcttcaggcaaacaaaagga 692
Query: 125 ggtgtagaagaattggaagaccacagagctcgttctgtttcatctcttcctatagcaatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 ggtgtagaagaattggaagaccacagagctcgttctgtttcatctcttcctatagcaatt 632
Query: 185 tgtggttattttatgccatcggattaagaaccttcaaataacagctgggtaaggtggttc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tgtggttattttatgccatcggattaagaaccttcaaataacagctgggtaaggtggttc 572
Query: 245 attgctataatccctgagtatgaaactattgatgtgaaacttcttgtgccttaaaaaagg 304
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 571 attgctataatccctgagtatcaaactattgatgtgaaacttcttgtgccttaaaaaagg 512
Query: 305 cgtccttggatctgagtgtgatatagactttccaaccagaggaagcaacgctcactagac 364
||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||
Sbjct: 511 cgtccttggatctgagtgtgatatagactttccaaccagagaaagcaacactcacaagac 452
Query: 365 acatcatgggggatgtgtttaggaagtagaagtgacatagctagtttctgggaatggtac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 acatcatgggggatgtgtttaggaagtagaagtgacatagctagtttctgggaatggtac 392
Query: 425 ggaaagtaaaggaaatgagatagaagaagaatgttaagcctatattccctagggctacat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ggaaagtaaaggaaatgagatagaagaagaatgttaagcctatattccctagggctacat 332
Query: 485 tgaaaatggtgacgcacttattcagtacagttgtttgggaatgtcaagcagaagcttgta 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tgaaaatggtgacgcacttattcagtacagttgtttgggaatgtcaagcagaagcttgta 272
Query: 545 aaaaagaaaaacatatgggtttattgggatatttgtgttttaaataagatttaaatattt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aaaaagaaaaacatatgggtttattgggatatttgtgttttaaataagatttaaatattt 212
Query: 605 atcctaa 611
|||||||
Sbjct: 211 atcctaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1010
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1000
Effective search space: 601000
Effective search space used: 601000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no266_n13.g1 MSMg01no266_n13.g1 CHROMAT_FILE:
MSMg01no266_n13.g1 PHD_FILE: MSMg01no266_n13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:44 2005
(291 letters)
>mm_chr7_69405142_69405831
Length = 690
Score = 540 bits (279), Expect = e-158
Identities = 288/291 (98%), Gaps = 1/291 (0%)
Strand = Plus / Plus
Query: 1 attaagttttctcttgactcctccataaatgcaccctacatattgtgcatgtgctttgag 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attaacttttctcttgactcctccataaatgcaccctacatattgtgcatgtgctttgag 260
Query: 61 taaataaaaatttaaaacttaaagatttgcttttcttcatatggttgccaatatttataa 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 taaataaaaatttaaaacttaaagatttgcttttcttcatatgtttgccaatatttataa 320
Query: 121 tcatttacctatgctgtttgctgaatgctttctcattgttgtgtttggaataccagaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 tcatttacctatgctgtttgctgaatgctttctcattgttgtgtttgga-taccagaggt 379
Query: 181 aaaagctaagtggccataagaatgcagctttactggtggttccttatcctattctatttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aaaagctaagtggccataagaatgcagctttactggtggttccttatcctattctatttg 439
Query: 241 ttgaatttctattttatgctagttttatagtgttttacttaccaatctttg 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttgaatttctattttatgctagttttatagtgttttacttaccaatctttg 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 690
Length adjustment: 9
Effective length of query: 282
Effective length of database: 681
Effective search space: 192042
Effective search space used: 192042
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
