Query= MSMg01no267_c13.b1 MSMg01no267_c13.b1 CHROMAT_FILE:
MSMg01no267_c13.b1 PHD_FILE: MSMg01no267_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:08 2005
(319 letters)
>mm_chr7_57266511_57267229
Length = 719
Score = 607 bits (314), Expect = e-178
Identities = 314/314 (100%)
Strand = Plus / Minus
Query: 5 gaattctagaaacagagatgatactttggacaggtgagaaacagggtctcagagatgtca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gaattctagaaacagagatgatactttggacaggtgagaaacagggtctcagagatgtca 567
Query: 65 catgatttgacaaaagtcacacaactaagtgtagaactgcaatatgaaattttgggaaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 catgatttgacaaaagtcacacaactaagtgtagaactgcaatatgaaattttgggaaac 507
Query: 125 agcttcctacatgaactatgttccctctatagactctcctgcccccaatgttactatgta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 agcttcctacatgaactatgttccctctatagactctcctgcccccaatgttactatgta 447
Query: 185 aggtctctaataaaaaatacattcctctagagtctagtaccaaacccagagtctttctct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 aggtctctaataaaaaatacattcctctagagtctagtaccaaacccagagtctttctct 387
Query: 245 tcctttaactcagctacttctatttcaatcttccatctccctgaactttctgaaaaagta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tcctttaactcagctacttctatttcaatcttccatctccctgaactttctgaaaaagta 327
Query: 305 tgactgtcactcac 318
||||||||||||||
Sbjct: 326 tgactgtcactcac 313
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no267_c13.g1 MSMg01no267_c13.g1 CHROMAT_FILE:
MSMg01no267_c13.g1 PHD_FILE: MSMg01no267_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:08 2005
(550 letters)
>mm_chr7_57119280_57120229
Length = 950
Score = 924 bits (478), Expect = 0.0
Identities = 523/545 (95%), Gaps = 11/545 (2%)
Strand = Plus / Plus
Query: 1 ttcccacgaatctttgctttttgggcttctctgcagttctataggctgtggcttaatgat 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcccacgaatctttgcttgttgggcttctctgcagttctataggctgtggcttaatgat 260
Query: 61 cctgccttttccttaaatagacaaaggtatggctgaggcaatttaaaatgctgctgtgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgccttttccttaaatagacaaaggtatggctgaggcaatttaaaatgctgctgtgtg 320
Query: 121 tcctgccattttgttagattttgatggcatctgcagtatgctgagccaggaggatcacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctgccattttgttagattttgatggcatctgcagtatgctgagccaggaggatcacag 380
Query: 181 gggccatctagcctgtgaaatgtaagcggggctggtcccttctcaccacctggaagtcca 240
||||||||||||||| ||||||||||| ||||||||| ||||||| |||||||||||||
Sbjct: 381 gggccatctagcctgcgaaatgtaagcagggctggtctcttctcaacacctggaagtccg 440
Query: 241 tctagcttagtaaagctgaagggtgagaatattctggaagaaagtaggaaactcaaactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctagcttagtaaagctgaagggtgagaatattctggaagaaagtaggaaactcaaactg 500
Query: 301 cttcttatgaagtgagtgagaccttaagacaaccgaatgcttagaaacaaaagaattgat 360
||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 501 cttcttatgaagtgagtgagaatttaagacaatcgaatgcttagaaacaaaagaattgat 560
Query: 361 ttaattttgtgtgtatttgcttttttttttttttttttttttttccattttattgattga 420
|||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 561 ttaattttgtgtgtatttgctttttttttttttt-----------cattttattgattga 609
Query: 421 agcagggacttgctaggtagcccagcctggcctcaactcaaatcaggcctctgacttgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 agcagggacttgctaggtagcccagcctggcctcaactcaaatcaggcctctgacttgat 669
Query: 481 ctaacctcctgattgctttgctttgttttgntcgatctctccctctccctctccctctcc 540
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 670 ctaacctcctgattgctttgctttgttttgctcgatctctccctctccctctccctctct 729
Query: 541 ctctc 545
|||||
Sbjct: 730 ctctc 734
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
