Query= MSMg01no267_m11.b1 MSMg01no267_m11.b1 CHROMAT_FILE:
MSMg01no267_m11.b1 PHD_FILE: MSMg01no267_m11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:55 2005
(317 letters)
>mm_chr7_142449332_142450048
Length = 717
Score = 572 bits (296), Expect = e-168
Identities = 308/312 (98%)
Strand = Plus / Plus
Query: 4 ggaattccctgaggaccggatgggactgagggtgtcataatcaattccaagtcacagctt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccctgaggaccggatgggactgagggtgtcataatcaattccaagtcacagctt 263
Query: 64 ctagcacggggcccagagcagagtggatgaacacaaaaatatgttttcagggaagaaatg 123
||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctagcacagggcccagagcaaagtggatgaacacaaaaatatgttttcagggaagaaatg 323
Query: 124 gcaggcagagtgagtacctctaacacagttaactgctgctaactttcatttttggtgttg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcaggcagagtgagtacctctaacacagttaactgctgctaactttcatttttggtgttg 383
Query: 184 acaggggtctcggtacccttcctgtcagtcccagacatcgcactgggatccaggcacctg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acaggggtctcggtacccttcctgtcagtcccagacatcgcactgggatccaggcacctg 443
Query: 244 aaatacctttaaagacagaagggaagaatcattatatccacgccttgaaggaccatttag 303
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 444 aaatacctttaaagacagaagggaagaatcattagatctacgccttgaaggaccatttag 503
Query: 304 catgcttattat 315
||||||||||||
Sbjct: 504 catgcttattat 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no267_m11.g1 MSMg01no267_m11.g1 CHROMAT_FILE:
MSMg01no267_m11.g1 PHD_FILE: MSMg01no267_m11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:55 2005
(626 letters)
>mm_chr7_142599987_142601012
Length = 1026
Score = 748 bits (387), Expect = 0.0
Identities = 432/463 (93%), Gaps = 28/463 (6%)
Strand = Plus / Minus
Query: 1 tttgctgtaatgatacacagacatcgggtgacaccatcagttaacgaggcagtatgacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tttgctgtaatgatacacagacatcgggtgacaccatcagttaacgaggcagtatgacaa 394
Query: 61 gggcaggaggaagtgagattccatctagctcaaatttggcctctgtactctgtagccttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gggcaggaggaagtgagattccatctagctcaaatttggcctctgtactctgtagccttg 334
Query: 121 ggaagaggttggttaagtaaaggcagtggccagccagtgacaacagcagtcaggaatgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ggaagaggttggttaagtaaaggcagtggccagccagtgacaacagcagtcaggaatgga 274
Query: 181 ctcatgtgggctctctagccagatggtggccctgcctcccttccccagagggctggttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ctcatgtgggctctctagccagatggtggccctgcctcccttccccagagggctggttgg 214
Query: 241 gggagcaagtaccctcggatagcactgatatcccccccaaa--------------acaca 286
|||||||||||| ||||||||||||||||| |||||
Sbjct: 213 gggagcaagtac------------ctgatatcccccccaaaacacacacacacacacaca 166
Query: 287 ctcacacacacacacacagag-ggagagagagagagagacagagacagagacgagacaca 345
| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |
Sbjct: 165 cacacacacacacacacagagagg-gagagagagagagacagagacagagacgagacaga 107
Query: 346 cagagacagagacatacaaagacagatgacagagacagaaaaagatagagagacagagag 405
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 gagagacagagacatacaaagacagatgacagagacagaaaaagatagagagacagagag 47
Query: 406 acagagagacagagatgacagaggcagagacagagagacagag 448
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 acagagagacagagatgacagaggcagagacagagagacagag 4
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
