Query= MSMg01no268_c08.b1 MSMg01no268_c08.b1 CHROMAT_FILE:
MSMg01no268_c08.b1 PHD_FILE: MSMg01no268_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:23 2005
(314 letters)
>mm_chr7_70921875_70922587
Length = 713
Score = 522 bits (270), Expect = e-152
Identities = 300/310 (96%), Gaps = 1/310 (0%)
Strand = Plus / Plus
Query: 5 gaattctctgtatttataaaactctgtctttgacttatggaaaggcattttagtgtggct 64
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 205 gaattctctgtatttataaaactctgtctttgacttatggaaagacattttagtgtggct 264
Query: 65 tatatataatatcacatgaagaatatttaacatctctcaatttttttttctgtaaaatct 124
|||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 265 tatatataatatcaaaagaagaatatttaacatctctcaatttttttt-ctgtaaaatct 323
Query: 125 aaaaattcctaagtgtgcccagcttaaaagtcagctgaatatacctgtcaggtatgccaa 184
|||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||
Sbjct: 324 aaaaattcctaagtgtgcccagtttaaaagtcggcagaatatacctgtcaggtatgccaa 383
Query: 185 gcccatctcagctgctcaagagcgctgcctgcaagagtcagtgacattgttgctgagcat 244
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gcctatctcagctgctcaagagcgctgcctgcaagagtcagtgacattgttgctgagcat 443
Query: 245 cagggtatctggagcactagacggggacatccttcagattctgcctttggacatctcttg 304
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 444 cagggtatctggagcactagacagggacatccttcagattctgtctttggacatctcttg 503
Query: 305 gaaatgggtc 314
||||||||||
Sbjct: 504 gaaatgggtc 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 713
Length adjustment: 9
Effective length of query: 305
Effective length of database: 704
Effective search space: 214720
Effective search space used: 214720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no268_c08.g1 MSMg01no268_c08.g1 CHROMAT_FILE:
MSMg01no268_c08.g1 PHD_FILE: MSMg01no268_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:23 2005
(281 letters)
>mm_chr7_71108879_71109559
Length = 681
Score = 540 bits (279), Expect = e-158
Identities = 279/279 (100%)
Strand = Plus / Minus
Query: 1 aaggccagcctagtctatggccagccaggagtcacatagtgagactccaattttaaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 aaggccagcctagtctatggccagccaggagtcacatagtgagactccaattttaaaaaa 487
Query: 61 aacaaaaaacttttttttcttcatgaaaattggcattaataatccatagtatggctgggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 aacaaaaaacttttttttcttcatgaaaattggcattaataatccatagtatggctgggc 427
Query: 121 tggctgggtgcattgagagcagatgctgggtagtcagataggtaaaggggtttcgtcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tggctgggtgcattgagagcagatgctgggtagtcagataggtaaaggggtttcgtcagc 367
Query: 181 ccccagcagggagcgcaaggtacctgggcttcctgaaccccgtgcacagtgctgggacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ccccagcagggagcgcaaggtacctgggcttcctgaaccccgtgcacagtgctgggacca 307
Query: 241 tacactctcccctctagcttatggggatggagatgctgg 279
|||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tacactctcccctctagcttatggggatggagatgctgg 268
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
