Query= MSMg01no268_d22.b1 MSMg01no268_d22.b1 CHROMAT_FILE:
MSMg01no268_d22.b1 PHD_FILE: MSMg01no268_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:29 2005
(320 letters)
>mm_chr7_89810329_89811047
Length = 719
Score = 565 bits (292), Expect = e-165
Identities = 314/332 (94%), Gaps = 18/332 (5%)
Strand = Plus / Plus
Query: 5 gaattcccacccatgatggcttctgtcttttggctcttcctgtcttcagagactgaacca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 gaattcccacccatgatggcttctgtcttttggctcttcctgtcttcagagactgaacca 247
Query: 65 cagggaatcgacaccccactcacctccatcgacacaagacccacaggctcccctttcctc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 cagggaatcgacaccccactcacctccatcgacacaagacccacaggctcccctttcctc 307
Query: 125 ctgcctatcagttagtctaggagggaaggagtccctttttgtgca--------------- 169
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ctgcctatcagttagtctaggagggaaggagtccctttttgtgcattttgactgaaaaat 367
Query: 170 --gatttaattccccctcttaagacaatggcttcttttttcttttttcttttttccattt 227
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 368 cagatttaattccccctcttaagacaatggcttcttttttcttttt-cttttttccattt 426
Query: 228 tgtgaagcatgcggttgatgccaggcttaagataaaacttggtggttgaacgccccatgc 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tgtgaagcatgcggttgatgccaggcttaagataaaacttggtggttgaacgccccatgc 486
Query: 288 atggctttgtttaatcctcccggcacccctga 319
||||||||||||||||||||||||||||||||
Sbjct: 487 atggctttgtttaatcctcccggcacccctga 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 719
Length adjustment: 9
Effective length of query: 311
Effective length of database: 710
Effective search space: 220810
Effective search space used: 220810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no268_d22.g1 MSMg01no268_d22.g1 CHROMAT_FILE:
MSMg01no268_d22.g1 PHD_FILE: MSMg01no268_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:29 2005
(293 letters)
>mm_chr7_89992123_89992815
Length = 693
Score = 555 bits (287), Expect = e-162
Identities = 290/291 (99%)
Strand = Plus / Minus
Query: 1 catctctgaaccaacagtgaaagaagacacccaactcctacaaattgtcctctgacttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 catctctgaaccaacagtgaaagaagacacccaactcctacaaattgtcctctgacttcc 518
Query: 61 atacacatgctgtgaagtgtgtgcaccctctactgcaacacacaaaaagtaactgtcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 atacacatgctgtgaagtgtgtgcaccctctactgcaacacacaaaaagtaactgtcatt 458
Query: 121 tttcatatgaatttggaaatcacaagtgagaggaaacatatactatttgtgtttaagaaa 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tttcatatgaatttagaaatcacaagtgagaggaaacatatactatttgtgtttaagaaa 398
Query: 181 ctgggttaattcatatgtgattgtcctcagttgtacccatgtgactttgttactcattgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ctgggttaattcatatgtgattgtcctcagttgtacccatgtgactttgttactcattgt 338
Query: 241 ggttgaaaagcttgtattgtgtacagtagacattcttttgttgatggataa 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ggttgaaaagcttgtattgtgtacagtagacattcttttgttgatggataa 287
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
