Query= MSMg01no269_c04.b1 MSMg01no269_c04.b1 CHROMAT_FILE:
MSMg01no269_c04.b1 PHD_FILE: MSMg01no269_c04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:32 2005
(686 letters)
>mm_chr7_84714674_84715759
Length = 1086
Score = 1266 bits (655), Expect = 0.0
Identities = 676/683 (98%)
Strand = Plus / Plus
Query: 4 ggaattcttttttattacacaagcatgtctaataatatacaagtgggttgagtggttctg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttttttattacacaagcatgtctaataatatacaagtgggttgagtggttctg 263
Query: 64 ctgatgaaagatggggaaccagcccatatatgtatatgatcagccctgtgtctgtttgct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctgatgaaagatggggaaccagcccatatatgtatatgatcagccctgtgtctgtttgct 323
Query: 124 ggcctgacttaccttatctggcctcttgtaggatgcaggcaaaagatatgggatgattga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggcctgacttaccttatctggcctcttgtaggatgcaggcaaaagatatgggatgattga 383
Query: 184 attctaggacactggtctcatcctgcaacaggtcaagatagatgaagattcataacagag 243
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 384 attctaggacactggtctcatcctgcaacaggtcaatctagatgaagattcataacggag 443
Query: 244 tcatgggagtcatagaaaagcagaaggtcctggtaggatggctctgaatgttcatcctct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcatgggagtcatagaaaagcagaaggtcctggtaggatggctctgaatgttcatcctct 503
Query: 304 cattccattatagtttgttaactggagaaagtcaaacaaaactcaggtttaagggaacag 363
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 504 cattccattatagtttgttaactggagaaagccaaacaaaactcaggtttaagggaacag 563
Query: 364 ctttaaaatcatactgcaaagggcatagtgatggagttgtagccattttggcaattatta 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctttaaaatcatactgcaaagggcatagtgatggagttgtagccattttggcaattatta 623
Query: 424 tatggcaagattattcaggaaatgttataatgttatatttagatattatctaaatacata 483
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 624 tatggcaagattattcaggaaatattataatgttatatttagatattatctaaatacata 683
Query: 484 ttagaataaacagtaaccatcatatttagttaaacacagtacctattcatgaactacagt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 684 ttagaataaacagtaaccatcatatttagttaaacacagtacctattcatgaagtgcagt 743
Query: 544 tataaggagtgagctgggatgaaattaaagttagatttaggtaatgtattttctactggt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tataaggagtgagctgggatgaaattaaagttagatttaggtaatgtattttctactggt 803
Query: 604 tagcagtggaataatctgagcctagaagaggtaatattgagaactgtaaccgggatacat 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tagcagtggaataatctgagcctagaagaggtaatattgagaactgtaaccgggatacat 863
Query: 664 tgtgtagaattaattggagtaga 686
|||||||||||||||||||||||
Sbjct: 864 tgtgtagaattaattggagtaga 886
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1086
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1076
Effective search space: 727376
Effective search space used: 727376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no269_c04.g1 MSMg01no269_c04.g1 CHROMAT_FILE:
MSMg01no269_c04.g1 PHD_FILE: MSMg01no269_c04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:32 2005
(336 letters)
>mm_chr7_84873804_84874538
Length = 735
Score = 572 bits (296), Expect = e-168
Identities = 326/336 (97%), Gaps = 1/336 (0%)
Strand = Plus / Minus
Query: 1 agttcccagcactcacacagatgctcacaactattgccaggaaccatgcatacacgtgat 60
||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 645 agttcccagcattcacacagatgctcacaactattgccaggaaccaggcatacacgtgat 586
Query: 61 acagagacatacatacaggcaaaccaaacacaaacataaaatgaaataaaataaaatgaa 120
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 585 acagagacatacacacaggcaaagcaaacacaaacataaaatgaaataaaataaaatgaa 526
Query: 121 ataaaaattaaagcaaacattatctaaaacacagtaacaatttattactgagccccaatc 180
|||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 525 ataaaaattaaatcaaatattatctaaaacacagtaacaatttattactgggccccaatc 466
Query: 181 aatactgactcaatatattaaatatacaaatgaatttcattgataactatgttctcctct 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 465 aatactgactcaatatattaaatatacaaatgaatttcattgataagtatgttctcctct 406
Query: 241 tgttggaacagccaacaatcattttccaaaactattcntttttaatcaacataattttga 300
|||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 405 tgttggaacagccaacaatcatttcccaaaactattc-tttttaatcaacataattttga 347
Query: 301 acttctcctatctatagctgtataggatatctcagg 336
||||||||||||||||||||||||||||||||||||
Sbjct: 346 acttctcctatctatagctgtataggatatctcagg 311
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 735
Length adjustment: 9
Effective length of query: 327
Effective length of database: 726
Effective search space: 237402
Effective search space used: 237402
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
