Query= MSMg01no271_d14.b1 MSMg01no271_d14.b1 CHROMAT_FILE:
MSMg01no271_d14.b1 PHD_FILE: MSMg01no271_d14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:03 2005
(314 letters)
>mm_chr7_73413096_73413804
Length = 709
Score = 565 bits (292), Expect = e-165
Identities = 302/308 (98%), Gaps = 5/308 (1%)
Strand = Plus / Minus
Query: 5 gaattcctgagacccagaggcagggcatgggaaggagagtggcaagagacgaaatctcca 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 507 gaattcctgagacccaga-----ggcatgggaaggagagtggcaagagacgaaatctcca 453
Query: 65 tggaatggaggttttgtgtgatggcctttagggatgtccggtgcaggctgccccttctgc 124
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 452 tggaatggaggttttgtgtgatggcctttagggttgtccggtgcaggctgccccttctgc 393
Query: 125 ccccaacacgagagctttgcaagttagtgtagtcttcagatgctctcagtggagagcatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ccccaacacgagagctttgcaagttagtgtagtcttcagatgctctcagtggagagcatt 333
Query: 185 tacaggcctcacagtctgcgagaggaggcttagacgacgtgagagttgactagggtcgga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tacaggcctcacagtctgcgagaggaggcttagacgacgtgagagttgactagggtcgga 273
Query: 245 tcagcagaatggactctgacatttgcatggatctgaggctcttaagctgtcagtggggac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tcagcagaatggactctgacatttgcatggatctgaggctcttaagctgtcagtggggac 213
Query: 305 atggacag 312
||||||||
Sbjct: 212 atggacag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 709
Length adjustment: 9
Effective length of query: 305
Effective length of database: 700
Effective search space: 213500
Effective search space used: 213500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no271_d14.g1 MSMg01no271_d14.g1 CHROMAT_FILE:
MSMg01no271_d14.g1 PHD_FILE: MSMg01no271_d14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:03 2005
(619 letters)
>mm_chr7_73248976_73249994
Length = 1019
Score = 1135 bits (587), Expect = 0.0
Identities = 611/619 (98%)
Strand = Plus / Plus
Query: 1 ttagaagtgagattgctaggtcaaaagctaacgtggaggccaaggaggccggtcagtagg 60
|||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 201 ttagaagtgagattgctaggtcaaaagctaacgtagaggccaaggaggtgggtcagtagg 260
Query: 61 taaagttcttgctaggctaatgcaaggcccaattaggatcccttgaaaccacatcaaaac 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaagttcttgctaggctaattcaaggcccaattaggatcccttgaaaccacatcaaaac 320
Query: 121 agagcagcagtggcagctgcctgtaagcccagaaaagacaaagaaaggggatccctgtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagcagcagtggcagctgcctgtaagcccagaaaagacaaagaaaggggatccctgtgg 380
Query: 181 caagctggttcgactagttgattttgagaacgttgcttctgttgagaaactgtgcctcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caagctggttcgactagttgattttgagaacgttgcttctgttgagaaactgtgcctcaa 440
Query: 241 taaataaagtgcagagtaaccaaagaaaacacccaacatcaacttttaggcctctatact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaataaagtgcagagtaaccaaagaaaacacccaacatcaacttttaggcctctatact 500
Query: 301 caagtccacatgtgtacctctcccgggtatgcatgcactcacaccacaggctaaggaagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caagtccacatgtgtacctctcccgggtatgcatgcactcacaccacaggctaaggaagg 560
Query: 361 gataagtaagtgccactgccactactgacgacgaaaaacttggcctcaaagtgagtcaca 420
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gataagtaagtaccactgccactactgacgacgaaaaacttggcctcaaagtgagtcaca 620
Query: 421 aagcacatctcgccctcattcctgacacctctcagaaaggccttcatttcttggctgaca 480
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 621 aagcacatctcgcccttattcctgacacttctcagaaaggccttcatttcttggctgaca 680
Query: 481 acagttagcacctactgggtaagtggtaagacaagatgacctagcactgttaacaggatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acagttagcacctactgggtaagtggtaagacaagatgacctagcactgttaacaggatg 740
Query: 541 tgtaacatgggtggatcacttagcagccaaagatacccggtaaacgttttttcttacctc 600
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 741 tgtaacatgggtggatcacttagcagccaaagatacccggtaaatgttttttcttacctc 800
Query: 601 caaaattatactttagatg 619
|||||||||||||||||||
Sbjct: 801 caaaattatactttagatg 819
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
