Query= MSMg01no271_f24.b1 MSMg01no271_f24.b1 CHROMAT_FILE:
MSMg01no271_f24.b1 PHD_FILE: MSMg01no271_f24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:14 2005
(321 letters)
>mm_chr7_149188828_149189548
Length = 721
Score = 615 bits (318), Expect = e-180
Identities = 318/318 (100%)
Strand = Plus / Minus
Query: 4 ggaattcttttaaagtttacagtagcttgccagtgctgcatccactggctggctctccac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ggaattcttttaaagtttacagtagcttgccagtgctgcatccactggctggctctccac 271
Query: 64 tgtccccagccccacagcggctctgtcctcagagggaacctgggctctggacccaccctg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tgtccccagccccacagcggctctgtcctcagagggaacctgggctctggacccaccctg 211
Query: 124 cccaagtcagacagacagaacaaacagacagacagacggcaggagggtgctgctgctgct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 cccaagtcagacagacagaacaaacagacagacagacggcaggagggtgctgctgctgct 151
Query: 184 actcctccttccctgaacagagaacagagacataaagaaactcaataaattaaaacagca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 actcctccttccctgaacagagaacagagacataaagaaactcaataaattaaaacagca 91
Query: 244 aataaataatactggtctcagcccagctccctggcagctctggagcacccaggtctttta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 aataaataatactggtctcagcccagctccctggcagctctggagcacccaggtctttta 31
Query: 304 tctccacttcagcccatg 321
||||||||||||||||||
Sbjct: 30 tctccacttcagcccatg 13
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no271_f24.g1 MSMg01no271_f24.g1 CHROMAT_FILE:
MSMg01no271_f24.g1 PHD_FILE: MSMg01no271_f24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:14 2005
(287 letters)
>mm_chr7_149001706_149002391
Length = 686
Score = 532 bits (275), Expect = e-155
Identities = 284/287 (98%), Gaps = 1/287 (0%)
Strand = Plus / Plus
Query: 1 ctgatagtcacatacgaggagggagcttgctgcccgacccagaactgcagcagtaagtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgatagtcacatacgaggagggagcttgctgcccgacccagaactgcagcagtaagtgc 260
Query: 61 ccctaatctttgcaccaagccacactggggtctggaattcccccgggaatgatgaagcta 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccctaacctttgcaccaagccacactggggtctggaattcccccgggaatgatgaagcta 320
Query: 121 tgggtggttggagatgagtggttgcccttggtgggaaagaagcctgctgtggaccagtat 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 tgggtggttggagatgagtggttgcccttggtgggaaggaagcctgctgtggaccagtat 380
Query: 181 ctagcagcagaacttactggtgcagaagccaggctgtgccctgcaaggcctaggctacag 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 c-agcagcagaacttactggtgcagaagccaggctgtgccctgcaaggcctaggctacag 439
Query: 241 cctgtatgtcttttgcacaggtcagaagggctgtgaagtcaacggga 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cctgtatgtcttttgcacaggtcagaagggctgtgaagtcaacggga 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 686
Length adjustment: 9
Effective length of query: 278
Effective length of database: 677
Effective search space: 188206
Effective search space used: 188206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
