Query= MSMg01no272_c06.b1 MSMg01no272_c06.b1 CHROMAT_FILE:
MSMg01no272_c06.b1 PHD_FILE: MSMg01no272_c06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:12 2005
(320 letters)
>mm_chr7_80689217_80689935
Length = 719
Score = 572 bits (296), Expect = e-168
Identities = 311/316 (98%), Gaps = 1/316 (0%)
Strand = Plus / Plus
Query: 5 gaattcacatattttaacctctcctgtcacagatacatttgtatccattaaaaatagtta 64
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacatattttaagttctcctgtcacagatacatttgtatccattaaaaatagtta 264
Query: 65 acagccaagggtcaaattcttaagaacttaacatgagtatcatagtgcatatatgaaaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acagccaagggtcaaattcttaagaacttaacatgagtatcatagtgcatatatgaaaag 324
Query: 125 taaaaccaaatattaaaattcaagaatggtgggagactaaattacaaccacatgtggaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taaaaccaaatattaaaattcaagaatggtgggagactaaattacaaccacatgtggaca 384
Query: 185 atttcaatgcaaaaagtttccaagctctttcaaagaaaactaattatataatcttagatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atttcaatgcaaaaagtttccaagctctttcaaagaaaactaattatataatcttagatt 444
Query: 245 tttaaaaaaagcaatagctaactgcatggcatactttattatgtcttatagatattaatt 304
|||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 445 tttaaaaaaagcaatagctaactgcatggcatactttaaca-gtcttatagatattaatt 503
Query: 305 ttacttagaagcacct 320
||||||||||||||||
Sbjct: 504 ttacttagaagcacct 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 719
Length adjustment: 9
Effective length of query: 311
Effective length of database: 710
Effective search space: 220810
Effective search space used: 220810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no272_c06.g1 MSMg01no272_c06.g1 CHROMAT_FILE:
MSMg01no272_c06.g1 PHD_FILE: MSMg01no272_c06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:12 2005
(278 letters)
>mm_chr7_80840846_80841523
Length = 678
Score = 499 bits (258), Expect = e-146
Identities = 273/282 (96%), Gaps = 8/282 (2%)
Strand = Plus / Minus
Query: 1 ctctatgccacactcactgctaccgtcatctccaccaccaacctcacagcctggtctgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ctctatgccacactcactgctaccgtcatctccaccaccaacctcacagcctggtctgaa 312
Query: 61 gccctgaggtaatccctgggaatcgtctttgactacttcctctctgtcttcctatgtcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gccctgaggtaatccctgggaatcgtctttgactacttcctctctgtcttcctatgtcca 252
Query: 121 gatgagcaatgggtcctggagattttgttcttggttttgtgtgtttatttgtttgttttt 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 251 gatgagcaatgggtcctggagattttgttcttggttttgggtgtttatttgtttgttttt 192
Query: 181 cattgggtttctctatgtatccctggctatcctggaactcactatatagaccaggctggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 cattgggtttctctatgtatccctggctatcctggaactcactatatagaccaggctggc 132
Query: 241 cctaaactc----ttttagtttcagctgtgtctgcctcccag 278
||||||||| |||||||||||||||||||||||||
Sbjct: 131 cctaaactcacag----agtttcagctgtgtctgcctcccag 94
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 678
Length adjustment: 9
Effective length of query: 269
Effective length of database: 669
Effective search space: 179961
Effective search space used: 179961
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
