Query= MSMg01no272_c16.b1 MSMg01no272_c16.b1 CHROMAT_FILE:
MSMg01no272_c16.b1 PHD_FILE: MSMg01no272_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:14 2005
(323 letters)
>mm_chr7_111203442_111204164
Length = 723
Score = 455 bits (235), Expect = e-132
Identities = 298/319 (93%), Gaps = 4/319 (1%)
Strand = Plus / Plus
Query: 4 ggaattcaatttggttgtgtgtaacttggattagctacaaatacctacaaagcaaagaa- 62
|||||||||| |||||||||||||||||||||| ||| | |||||||||||||||| ||
Sbjct: 204 ggaattcaatgtggttgtgtgtaacttggattaactatatatacctacaaagcaaa-aag 262
Query: 63 ggaccattggaggagggggaagatctctaggaaggtgaggaaaagggtgataaggagatg 122
|||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 263 ggaccattggaggagggggaagatctctaggaagatgaggaaaaggatgttaaggagatg 322
Query: 123 ctaggaaatgggagaaaacttaactgaggacatgtaagagggtaatcaacaagatgagaa 182
|||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||
Sbjct: 323 ctaggaaatgggagaaaacttaactgaggacaaataatagggtaatcaacat-atgagaa 381
Query: 183 agggagaaata-caaatactacaaaaggtgtttgaaaatccatagagaaccattatttta 241
||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agggagaaataacaaataatacaaaaggtgtttgaaaatccatagagaaccattatttta 441
Query: 242 tgtgattactttaaaatgcatatataacatacatacatacttacatacatacatacatac 301
| ||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 442 tatgattactttaaaatacatacataacatacatacatacatacatacatacatacatac 501
Query: 302 atacatacaatacatatat 320
|||||||||||||| ||||
Sbjct: 502 atacatacaatacacatat 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no272_c16.g1 MSMg01no272_c16.g1 CHROMAT_FILE:
MSMg01no272_c16.g1 PHD_FILE: MSMg01no272_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:14 2005
(287 letters)
>mm_chr7_111218295_111218980
Length = 686
Score = 518 bits (268), Expect = e-151
Identities = 280/284 (98%), Gaps = 1/284 (0%)
Strand = Plus / Minus
Query: 1 aggtaggtgagttttacagggctgtgatcatggaccagtgatgagatatcctgggtccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 aggtaggtgagttttacagggctgtgatcatggaccagtgatgagatatcctgggtccta 424
Query: 61 ggcaggcctgcaggttgaatgaggtgaagagaggtgctggcagaagcactttgggtcaga 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 423 ggcaggcctgcaggttgaatgaagtgaagagaggtgctggcagaagcactttgggtcaga 364
Query: 121 agtttcttccagtgttaactgattacatagtaggcaagggaaaaggagatgctctgacag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 363 agtttcttccagtgttaactgattacatagtaggcaagggaaaaggagatgccctgacag 304
Query: 181 tgcttgaaactgagttttaaccttaggcataatcagattcactgatttcaagaaccaaat 240
||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 303 tgcttgaaactgagtttta-ccttaggcataatcagattaactgatttcaagaaccaaat 245
Query: 241 acaatttaattctgaaataagttgttgtaaactcacataaatca 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 acaatttaattctgaaataagttgttgtaaactcacataaatca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 686
Length adjustment: 9
Effective length of query: 278
Effective length of database: 677
Effective search space: 188206
Effective search space used: 188206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
