Query= MSMg01no272_d07.b1 MSMg01no272_d07.b1 CHROMAT_FILE:
MSMg01no272_d07.b1 PHD_FILE: MSMg01no272_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:18 2005
(331 letters)
>mm_chr7_135250863_135251593
Length = 731
Score = 609 bits (315), Expect = e-179
Identities = 324/327 (99%)
Strand = Plus / Minus
Query: 5 gaattccatggttgcttccagtctcagcaccggctgggctctagaggggcatcagagggc 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 gaattccatggttgcctccagtctcagcaccggctgggctctagaggggcatcagagggc 472
Query: 65 catcaggaaccagcagacaccttccaagggggaagcctggtgcaatgagagggcctctca 124
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 catcaggaaccagcagagaccttccaagggggaagcctggtgcaatgagagggcctctca 412
Query: 125 cctgagcagcagaagatgcccctgcgccccaacagccaggtccatcaagccatccattgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 cctgagcagcagaagatgcccctgcgccccaacagccaggtccatcaagccatccattgt 352
Query: 185 gagatccttgcccccactcagagactgcccgaagtactggagcccaggggagaagtgggc 244
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gagatccttacccccactcagagactgcccgaagtactggagcccaggggagaagtgggc 292
Query: 245 gcctatgatccgctgagggagggaagaagagaggaaatagagaagtctgtggctcagtta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gcctatgatccgctgagggagggaagaagagaggaaatagagaagtctgtggctcagtta 232
Query: 305 gccaaggcacatactctcttctttaca 331
|||||||||||||||||||||||||||
Sbjct: 231 gccaaggcacatactctcttctttaca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 731
Length adjustment: 9
Effective length of query: 322
Effective length of database: 722
Effective search space: 232484
Effective search space used: 232484
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no272_d07.g1 MSMg01no272_d07.g1 CHROMAT_FILE:
MSMg01no272_d07.g1 PHD_FILE: MSMg01no272_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:18 2005
(293 letters)
>mm_chr7_135124468_135125162
Length = 695
Score = 532 bits (275), Expect = e-155
Identities = 288/293 (98%), Gaps = 2/293 (0%)
Strand = Plus / Plus
Query: 1 aattgtacctcttacaaattgcctttcatttctttagtacatgtgagaacaccaacttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 aattgtacctcttacaaattgcctttcatttctttagtacatgtgagaacatgaacttct 260
Query: 61 cttggagaaatgaatgcaaccagtgtaaggcacctaagccagatggcccaggagggggac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttggagaaatgaatgcaaccagtgtaaggcacctaagccagatggcccaggagggggac 320
Query: 121 caggaggctctcatatgggtaagaagggagcagagctggaactgagagctccagaaag-- 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caggaggctctcatatgggtaagaagggagcagagctggaactgagagctccagaaagag 380
Query: 179 cctcacacttgagatttgcaaaggtcacgggagggaaggtagaagaattgaagatgataa 238
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccccacacttgagatttgcaaaggtcacgggagggaaggtagaagaattgaagatgataa 440
Query: 239 catgactttttttctagggggaaactatggagatgatcgacgtggcagaggag 291
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catgactttttttctagggggaaactatggagatgatcgacgtggcagaggag 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 695
Length adjustment: 9
Effective length of query: 284
Effective length of database: 686
Effective search space: 194824
Effective search space used: 194824
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
