Query= MSMg01no272_d22.b1 MSMg01no272_d22.b1 CHROMAT_FILE:
MSMg01no272_d22.b1 PHD_FILE: MSMg01no272_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:21 2005
(234 letters)
>mm_chr7_149687833_149688466
Length = 634
Score = 389 bits (201), Expect = e-113
Identities = 222/233 (95%), Gaps = 8/233 (3%)
Strand = Plus / Plus
Query: 1 gggcagcttccctgtccttgttacctttggtcactcacatggccacagcccggcatgcaa 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 gggcagcttccctgtccttgttacctttggtcactcacatggccacagtagggcatgcaa 260
Query: 61 tctagagacatccaatatctaccttgtggttgagatattttcccctctaaggccacaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctagagacatccaatatctaccttgtggttgagatattttcccctctaaggccacaaag 320
Query: 121 cctctgtgttcatgtgtgtgtgtgtgtgtgtatgtatgtgtgtgtgtgttttcggatgtg 180
||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 cctctgtgttcatgtgtgtgtgtgt------atgtatgtgtgtgtgtgttttcggatgtg 374
Query: 181 ttcat--gtgtggaccagaggtcaaccttggatgtcatttttaggagcttgcc 231
||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ttcatatgtgtggaccagaggtcaaccttggatgtcatttttaggagcttgcc 427
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no272_d22.g1 MSMg01no272_d22.g1 CHROMAT_FILE:
MSMg01no272_d22.g1 PHD_FILE: MSMg01no272_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:21 2005
(287 letters)
>mm_chr7_149852061_149852748
Length = 688
Score = 542 bits (280), Expect = e-158
Identities = 286/288 (99%), Gaps = 1/288 (0%)
Strand = Plus / Minus
Query: 1 cacccctcttccaggctatcatgctcatgccagaaagaagccaagaatcttctttcaaat 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 cacccctcttccaggatatcatgctcatgccagaaagaagccaagaatcttctttcaaat 429
Query: 61 gttggttcagacactaaaacaattacatagtggtatggcttcagtctatccagacccagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gttggttcagacactaaaacaattacatagtggtatggcttcagtctatccagacccagg 369
Query: 121 acactggccttccctgctgacccctctccagtg-ccccacagcaacccttacttactttt 179
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 368 acactggccttccctgctgacccctctccagtgcccccacagcaacccttacttactttt 309
Query: 180 ggtgtgggttgtgttgatcagtttggtgcaatcctcatgttggtggttcaggtagtgact 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ggtgtgggttgtgttgatcagtttggtgcaatcctcatgttggtggttcaggtagtgact 249
Query: 240 tcttcccaggcttgcagattggcatagagcattgcttgggtcttcctg 287
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tcttcccaggcttgcagattggcatagagcattgcttgggtcttcctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 688
Length adjustment: 9
Effective length of query: 278
Effective length of database: 679
Effective search space: 188762
Effective search space used: 188762
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
