Query= MSMg01no274_j13.b1 MSMg01no274_j13.b1 CHROMAT_FILE:
MSMg01no274_j13.b1 PHD_FILE: MSMg01no274_j13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:09 2005
(353 letters)
>mm_chr7_6889305_6890058
Length = 754
Score = 623 bits (322), Expect = 0.0
Identities = 346/354 (97%), Gaps = 1/354 (0%)
Strand = Plus / Plus
Query: 1 cctcaaattcctccttccaactcttaagtgaagttgaactataagaaccatacatattta 60
||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 201 cctcaaattcctccttccaactcttaagtgaagttgaactataagaattatatatattta 260
Query: 61 cagtacacaacatggatgctctgatatatgtgtcaatcaaactattgacaaaccatcccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagtacacaacatggatgctctgatatatgtgtcaatcaaactattgacaaaccatcccc 320
Query: 121 tctccatggtgagaacatttaagatctgtcctagtgacttccaagtaacattagcattaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 tctccatggtgagaacatttaagatctgtcctagtgacttccaagtaacattaccattaa 380
Query: 181 attgaattgttacactgtccgaaagaacatgcaaaagaagaaatgggagcccagaagcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attgaattgttacactgtccgaaagaacatgcaaaagaagaaatgggagcccagaagcca 440
Query: 241 aaaaaa-cctccacccaatgacacataggccggtgtgagatgcagccagagtataaactc 299
|||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaaaaacctccacccaatgacacacaggccggtgtgagatgcagccagagtataaactc 500
Query: 300 aaatcctcgcgcccttgctctccatccctgctgctgtgctggcctcctgacact 353
|||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 501 aaatcctcacgcccttgctctccagccctgctgctgtgctggcctcctgacact 554
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 754
Length adjustment: 9
Effective length of query: 344
Effective length of database: 745
Effective search space: 256280
Effective search space used: 256280
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no274_j13.g1 MSMg01no274_j13.g1 CHROMAT_FILE:
MSMg01no274_j13.g1 PHD_FILE: MSMg01no274_j13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:10 2005
(304 letters)
>mm_chr7_7056198_7056901
Length = 704
Score = 557 bits (288), Expect = e-163
Identities = 297/300 (99%)
Strand = Plus / Minus
Query: 1 aaggacgtggctatctacttttcagaagaagaatggacacttcttgatgcctctcaaagg 60
||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 467 aaggacgtggctatctacttttcggaagaagaatggacacttcttgatgactctcaaagg 408
Query: 61 ctcctgtaccacagtgtgatgatggagatctttgtcctcatggcttcattgggtaagggc 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 407 ctcctgtaccacagtgtgatgatggagatctttgtcctcatggcttcattaggtaagggc 348
Query: 121 atcccatcttatcagagcaagtctgtgataggtgtagcttcttttctacagagggatgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 atcccatcttatcagagcaagtctgtgataggtgtagcttcttttctacagagggatgtg 288
Query: 181 ttttcccaaagttatgccatgtttggtgaatcatttccaaacatcctggagtacagaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ttttcccaaagttatgccatgtttggtgaatcatttccaaacatcctggagtacagaata 228
Query: 241 ctggtgacaatcctggcttagaacaattctctctctctctctccccctctctctctctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 ctggtgacaatcctggcttagaacaattctctctctctctctccccctctctctctctct 168
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 304
Length of database: 704
Length adjustment: 9
Effective length of query: 295
Effective length of database: 695
Effective search space: 205025
Effective search space used: 205025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
