Query= MSMg01no275_e10.b1 MSMg01no275_e10.b1 CHROMAT_FILE:
MSMg01no275_e10.b1 PHD_FILE: MSMg01no275_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:59 2005
(318 letters)
>mm_chr7_103059736_103060453
Length = 718
Score = 540 bits (279), Expect = e-158
Identities = 306/315 (97%)
Strand = Plus / Plus
Query: 4 ggaattcatctgaatttctaacagagcagtagcaagaacaataccatttcttccacctac 63
|||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 204 ggaatttatctgaaattctaacagagcagtagcaagaacaatatcatttcttccacctac 263
Query: 64 ccagtgggaacaaggctagctttgtggatggcctgataggtccactccactggatgtcag 123
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccagtgggaacaaggagagctttgtggatggcctgataggtccactccactggatgtcag 323
Query: 124 gtatcagctatattctaccctctccctgagtagattggaaatgaagggccggggctctct 183
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 324 gtatcagctatattctaccctctccctgagtagattggaaatgaagggccagggctctct 383
Query: 184 gtaccagtacagacatctctctcatggataaccgagacctcggctccatgacactgttta 243
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 384 gtaccagtacagacatctctctcatggataaccgagacctcagctccatgacactgttta 443
Query: 244 gttctttggtttatggtagggatttttgtctgtcctccttgcctgtagttatttctgcat 303
||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 444 gttctttggtttatggtagagatttttgtctgtcctccttgcctgtagctatttctgcat 503
Query: 304 ttatttaacatgtgt 318
|||||||||||||||
Sbjct: 504 ttatttaacatgtgt 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_e10.g1 MSMg01no275_e10.g1 CHROMAT_FILE:
MSMg01no275_e10.g1 PHD_FILE: MSMg01no275_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:59 2005
(294 letters)
>mm_chr19_24492500_24493193
Length = 694
Score = 518 bits (268), Expect = e-151
Identities = 291/306 (95%), Gaps = 14/306 (4%)
Strand = Plus / Minus
Query: 1 tcagtcaaacgttgagcctggtgctgcagatggtttgatctgctccattgcttggctcag 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tcagtcaaacgttgagcctagtgctgcagatggtttgatctgctccattgcttggctcag 337
Query: 61 caagcctctccctcagtccgatttgccatgttgttctttgtgtttaaagaagcagggcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 caagcctctccctcagtccgatttgccatgttgttctttgtgtttaaagaagcagggcac 277
Query: 121 gtttacaaagcatgtctggaaaaaaggaaatgatgtatggaaaatacctatgtagagtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gtttacaaagcatgtctggaaaaaaggaaatgatgtatggaaaatacctatgtagagtat 217
Query: 181 agagtcaggtgactc------------caggggctataaatatgtcagtgacttcatatc 228
||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 216 agagtcaggtgactcctcagctggaatcaggggctataaatatgtcagtgacttcatatc 157
Query: 229 taccatgggactggtattttccatctttaaacacaattttaataaacttagatg-attt- 286
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 156 taccatgggactggtattttccatctttaaacacaattttaataaacttagatgaatttg 97
Query: 287 tttttt 292
||||||
Sbjct: 96 tttttt 91
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
