Query= MSMg01no275_i06.b1 MSMg01no275_i06.b1 CHROMAT_FILE:
MSMg01no275_i06.b1 PHD_FILE: MSMg01no275_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:16 2005
(690 letters)
>mm_chr7_121945524_121946613
Length = 1090
Score = 1251 bits (647), Expect = 0.0
Identities = 677/687 (98%), Gaps = 1/687 (0%)
Strand = Plus / Minus
Query: 5 gaattcttgaactaa-ctgcaggctctagtctcagcttgcctttagctctctatgctaat 63
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 gaattcttgaacgaagatgcaggctctagtctcagcttgcctttagctctctatgctaat 846
Query: 64 cgagaatgcatttccctaagagcagattctgaaactaaagtgcctgagttccatccaatc 123
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 cgagaatgcatttggctaagagcagattctgaaactaaagtgcctgagttccatccaatc 786
Query: 124 tggccctgccacttgtggtgctgtgccctggcgcagatggtttactatagcctttctttg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 tggccctgccacttgtggtgctgtgccctggcgcagatggtttactatagcctttctttg 726
Query: 184 cctcggtttctttgcctattcagtgttggaataaacagcatctgtctctcatggtgctct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 cctcggtttctttgcctattcagtgttggaataaacagcatctgtctctcatggtgctct 666
Query: 244 tatcccaacctcatcagcacgcacagaaagaacgtctgcaggtacctaccacagtgcagt 303
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 tatcccaacctcgtcagcacgcacagaaagaacgtctgcaggtacctaccacagtgcagt 606
Query: 304 aaaacatcattattagtcaccatttttgcgcttcggaaaatgagataaacttcttaggac 363
|||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 605 aaaacatcattagcagtcaccatttttgggcttcggaaaatgagataaacttcttaggac 546
Query: 364 ttggtttcaccacttactaatgattaaaacgaagagatttgggatcttcacacacagcat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ttggtttcaccacttactaatgattaaaacgaagagatttgggatcttcacacacagcat 486
Query: 424 attaatcttctacactggatagccttagactaagtgtatatttaagcaaactacattaaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 attaatcttctacactggatagccttagactaagtgtatatttaagcaaactacattaaa 426
Query: 484 aattaaaaaaatatatgctttaagatatggtaggtacctcccacaaaggagtcaacaaaa 543
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 425 aattaaaaaaatatatgctttaagatatggtaggtacctcccacaagggagtcaacaaaa 366
Query: 544 gctagaattgttaactaagatttgattggtcagcatggacctctgtagtgaacatgcagg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gctagaattgttaactaagatttgattggtcagcatggacctctgtagtgaacatgcagg 306
Query: 604 ttatgctccttcccccactgcttccacgagcagctacacatggaatacacactcaaatgg 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ttatgctccttcccccactgcttccacgagcagctacacatggaatacacactcaaatgg 246
Query: 664 agatgtagatttcatatattggggtcc 690
|||||||||||||||||||||||||||
Sbjct: 245 agatgtagatttcatatattggggtcc 219
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1090
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1080
Effective search space: 734400
Effective search space used: 734400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_i06.g1 MSMg01no275_i06.g1 CHROMAT_FILE:
MSMg01no275_i06.g1 PHD_FILE: MSMg01no275_i06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:16 2005
(288 letters)
>mm_chr7_121798514_121799200
Length = 687
Score = 468 bits (242), Expect = e-136
Identities = 278/296 (93%), Gaps = 13/296 (4%)
Strand = Plus / Plus
Query: 1 tctacaataaaaatgcttcaccatgcagtattgcttttgttaattatatattacctgtgc 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 tctacaataaaaatgcttcaccatgcagtattgcttt-gttaattatatattacctgtgc 259
Query: 61 ttgttaattttaatagaaaagcatgagttaataaaagtcttacataaaattatgctacat 120
||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 260 ttgttaattttaatagaaaagcacgagttaataaaagtcttatataaaattatgctacat 319
Query: 121 tattttaggaggtatgattctgcggataaaacaggtttccttgaattctt--tctt--tc 176
||||||||||||||||||||||||||||||||| |||| ||||||||||| |||| ||
Sbjct: 320 tattttaggaggtatgattctgcggataaaacatgttttcttgaattcttcttcttcttc 379
Query: 177 ttttttttttttttttt--------accaactctatcatttttaattcattcatgtttgg 228
||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 380 tttttttttttttttttttttttttaccaactctatcatttttaattcattcatgtttgg 439
Query: 229 cgaatgttcagagatgtggctatccactcacaaacagctgccacattcatactgag 284
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgaatgttcagagatgtggctatccactcacaaacagctgccacattcatactgag 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 687
Length adjustment: 9
Effective length of query: 279
Effective length of database: 678
Effective search space: 189162
Effective search space used: 189162
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
