Query= MSMg01no275_m17.b1 MSMg01no275_m17.b1 CHROMAT_FILE:
MSMg01no275_m17.b1 PHD_FILE: MSMg01no275_m17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:35 2005
(632 letters)
>mm_chr7_110477930_110478961
Length = 1032
Score = 1120 bits (579), Expect = 0.0
Identities = 617/633 (97%), Gaps = 7/633 (1%)
Strand = Plus / Plus
Query: 1 agaaatatacagagaaagacatctctctttgtgaaataaaatactgacaaaaacaaatgt 60
|||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 201 agaaatatgcagagaaagacatctctctttgcaaaataaaatactgacaaaaagaaatgt 260
Query: 61 agttataaactgtactttacatgtattattatatgactaaataacatattttgaataaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agttataaactgtactttacatgtattattatatgactaaataacatattttgaataaat 320
Query: 121 atgtggtatcaaaatcaacaatgtaaatatacttaatatacatcctggaggataagtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgtggtatcaaaatcaacaatgtaaatatacttaatatacatcctggaggataagtttt 380
Query: 181 aatacatttctctaggtggattcttgtcctattctatagatgagaatgtatgcctagtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatacatttctctaggtggattcttgtcctattctatagatgagaatgtatgcctagtac 440
Query: 241 tgttaattaaataaaaaaaa-tcttaatttttgggctctcatgtccagattaattacagc 299
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgttaattaaataaaaaaaaatcttaatttttgggctctcatgtccagattaattacagc 500
Query: 300 tgtctttttaaatctgctgtgtcaaaaatgacttctaaatgtttaaacacacacacagac 359
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 501 tgtctttttaaatctgctgtgtcaaaaataacttctaaatgtttaaacacacacagagac 560
Query: 360 atagatgcacacacacaaatatacacacacacacacacacacacacacacatacactcat 419
||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 561 atagatgcacacacacaaata------cacacacacacacacacacacacatacactcat 614
Query: 420 accccccacatacccccccccacacacacaatccctactgtcagtctcaatcatagaagc 479
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 accccccacatactcctccccacacacacaatccctactgtcagtctcaatcatagaagc 674
Query: 480 tctttttttgtaatgatagtgaatgtagaaacacatgggtgcttatagcccagaataagt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tctttttttgtaatgatagtgaatgtagaaacacatgggtgcttatagcccagaataagt 734
Query: 540 gaagcttgagggttcattcctgaagaaaacacttatgttacctctgtaagacacagggga 599
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 gaagcttgagggttcgttcctgaagaaaacacttatgttacctctgtaagacacagggga 794
Query: 600 taagatatcaaggaggagggagtacaaaacata 632
|||||||||||||||||||||||||||||||||
Sbjct: 795 taagatatcaaggaggagggagtacaaaacata 827
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 72
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_m17.g1 MSMg01no275_m17.g1 CHROMAT_FILE:
MSMg01no275_m17.g1 PHD_FILE: MSMg01no275_m17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:36 2005
(283 letters)
>mm_chr7_110361527_110362208
Length = 682
Score = 540 bits (279), Expect = e-158
Identities = 282/283 (99%), Gaps = 1/283 (0%)
Strand = Plus / Plus
Query: 1 cagaaaactataaagagatcttatgctgagtgtaaatttcattgcccattttgcaaccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagaaaactataaagagatcttatgctgagtgtaaatttcattgcccattttgcaaccct 260
Query: 61 ctttagttattcataccctgttgtggttatttctcatttgctcagtattattctgtcact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttagttattcataccctgttgtggttatttctcatttgctcagtattattctgtcact 320
Query: 121 ccttttttttgagaggaatttatttatcatccattctatttatttatatttatttttatt 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccttttttt-gagaggaatttatttatcatccattctatttatttatatttatttttatt 379
Query: 181 tcaaatgttgcccctccttctagttcccccttcacagattcactcccttatctgtcctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcaaatgttgcccctccttctagttcccccttcacagattcactcccttatctgtcctct 439
Query: 241 gttttcctctgagagggtggaccccactctgggtattgttcca 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gttttcctctgagagggtggaccccactctgggtattgttcca 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 682
Length adjustment: 9
Effective length of query: 274
Effective length of database: 673
Effective search space: 184402
Effective search space used: 184402
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
