Query= MSMg01no277_f15.b1 MSMg01no277_f15.b1 CHROMAT_FILE:
MSMg01no277_f15.b1 PHD_FILE: MSMg01no277_f15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:28 2005
(229 letters)
>mm_chr7_18412963_18413591
Length = 629
Score = 406 bits (210), Expect = e-118
Identities = 224/234 (95%), Gaps = 9/234 (3%)
Strand = Plus / Plus
Query: 5 catccaccactttgtccagctccctttgatatctttgtgttggattgtgtctatttccgt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 196 catccaccactttgtccagctccctttgatatctttgtgttggattgtgtctatttctgt 255
Query: 65 gttgttggaagccgtgactttgggataggtgattctgggagtagt---------ggtttc 115
||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 256 gttgttggaagccgtgactttgggataggtgattctgggagtagttattacattggtttc 315
Query: 116 atgttccttgctggttaaattcttttctgattttttccttattgttgagatctttatacc 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 atgttccttgctggttaaattcttttctgattttttccttattgttgagatctttatacc 375
Query: 176 tgtgcatgatgatatgtgatcttacatatctcaatttccctcatgaaaatcttc 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tgtgcatgatgatatgtgatcttacatatctcaatttccctcatgaaaatcttc 429
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no277_f15.g1 MSMg01no277_f15.g1 CHROMAT_FILE:
MSMg01no277_f15.g1 PHD_FILE: MSMg01no277_f15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:28 2005
(234 letters)
>mm_chr7_18591677_18592310
Length = 634
Score = 426 bits (220), Expect = e-124
Identities = 229/232 (98%)
Strand = Plus / Minus
Query: 1 ccaagattttaatgttaaactctctcttacaggtgggactgaaaaaaacctttcctttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ccaagattttaatgttaaactctctcttacaggtgggactgaaaaaaacctttcctttaa 373
Query: 61 atctcctgagcagcacccacacctgtcctcacgactttatgtgtgtacagaaatcccaca 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 372 atctcctgagcagcacccacacctgtcctcatgactttatgtgtgtacagaaatcccaca 313
Query: 121 tgaaactagacttcaggtaactacacagaatgggtcataacaaacatcaggtgtttaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tgaaactagacttcaggtaactacacagaatgggtcataacaaacatcaggtgtttaaaa 253
Query: 181 ttagtgagtttctgatcgtggagagccctatgttaaatgaaagatatactgg 232
||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 252 ttagtgagtttctgagcggggagagccctatgttaaatgaaagatatactgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
