Query= MSMg01no277_l10.b1 MSMg01no277_l10.b1 CHROMAT_FILE:
MSMg01no277_l10.b1 PHD_FILE: MSMg01no277_l10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:54 2005
(234 letters)
>mm_chr7_89692770_89693403
Length = 634
Score = 439 bits (227), Expect = e-128
Identities = 230/231 (99%)
Strand = Plus / Minus
Query: 1 ggagggcatcataaacatcactggagcctgacaggaagtgaccaattacatcaagagtag 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 431 ggagggcatcataaacatcactggagcctgacaggaagtaaccaattacatcaagagtag 372
Query: 61 ctgggaaaaaacctacagcttgaggcctgtcaagatttgaaggggatttggagagaacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ctgggaaaaaacctacagcttgaggcctgtcaagatttgaaggggatttggagagaacaa 312
Query: 121 atcagtgacagctaatgtaccgtgtcgagaacacatctccacagggagcatgtgaaaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 atcagtgacagctaatgtaccgtgtcgagaacacatctccacagggagcatgtgaaaatg 252
Query: 181 attcaatttttattctctccaactgcttgcaggactcatcaagagaaagag 231
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 attcaatttttattctctccaactgcttgcaggactcatcaagagaaagag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no277_l10.g1 MSMg01no277_l10.g1 CHROMAT_FILE:
MSMg01no277_l10.g1 PHD_FILE: MSMg01no277_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:54 2005
(629 letters)
>mm_chr7_89573102_89574131
Length = 1030
Score = 1151 bits (595), Expect = 0.0
Identities = 619/627 (98%), Gaps = 1/627 (0%)
Strand = Plus / Plus
Query: 4 aaaaggaagcacaggagagagaagtgggtaaaatcagttacatcgtagccagggagaatg 63
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 204 aaaaggaagcacaggagagagaagtgggtaaaatcagggacatcgtagccagggagaatg 263
Query: 64 catgacagggtcaggggctggcagaaaatggtgctggggtctaaggagcccagccatcct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 catgacagggtcaggggctggcagaaaatggtgctggggtctaaggagcccagccatcct 323
Query: 124 aagagagaagaaaaataccactgggcctccttgagatgccgtttgctttctgttttctta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aagagagaagaaaaataccactgggcctccttgagatgccgtttgctttctgttttctta 383
Query: 184 agggg-aaaaaatctgacgtatccaatcagagaaaccagatgttttcattttataatgtg 242
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aggggaaaaaaatctgacgtatccaatcagagaaaccagatgttttcattttataatgtg 443
Query: 243 cccgttttaattattttagaatcaagatgttttctgtaagtgtttgtggaggagctatgg 302
|||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 444 cccgttttaattattttagaatcaagatgttttctgtaagtgaaggtggaggagttatgg 503
Query: 303 aaagaaacccgattctaactataaatggaacagatgggacggtgggaataaaaacaaatt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaagaaacccgattctaactataaatggaacagatgggacggtgggaataaaaacaaatt 563
Query: 363 aaaacaatattgcagggagctctcaactttcgtttaaaaaatatatgatgatatttttca 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aaaacaatattgcagggagctctcaactttcgtttaaaaaatatatgatgatatttttca 623
Query: 423 acttttcacattcgaccaattcatatatcaagtgacaagaagaaaaaccaatctcagctg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 acttttcacattcgaccaattcatatatcaagtgacaagaagaaaaaccaatctcagctg 683
Query: 483 tgtacagtttaaaatttgcctaaacgatctggacgcaccccatctaaaagtctagatgag 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgtacagtttaaaatttgcctaaacgatctggacgcaccccatctaaaagtctagatgag 743
Query: 543 ggcattaaactgctaattgtatttttctatgaactggaattttatattttacactatatg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ggcattaaactgctaattgtatttttctatgaactggaattttatattttacactatatg 803
Query: 603 atgatagacagggtatagctatgtttg 629
|||||||||||||||||| ||||||||
Sbjct: 804 atgatagacagggtatagttatgtttg 830
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1030
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1020
Effective search space: 631380
Effective search space used: 631380
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
