Query= MSMg01no278_g23.b1 MSMg01no278_g23.b1 CHROMAT_FILE:
MSMg01no278_g23.b1 PHD_FILE: MSMg01no278_g23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:46 2005
(590 letters)
>mm_chr7_131848130_131849119
Length = 990
Score = 1046 bits (541), Expect = 0.0
Identities = 571/581 (98%), Gaps = 2/581 (0%)
Strand = Plus / Minus
Query: 5 ggaattccgcaatattgaca-aatgcagataagccttgaacaccttagggcaaatgaaac 63
|||||||||||||| || | |||||||||||||||||||||||||||||||||||||||
Sbjct: 784 ggaattccgcaata-ggagataatgcagataagccttgaacaccttagggcaaatgaaac 726
Query: 64 aaacctgttacagggatgcaaagtacatgatttctaagattctcaaagggtcagaccgta 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 725 aaacctgttacagggatgcaaagtacatgatttctaagattctcaaagggtcagacggta 666
Query: 124 gaactgaagctgtggggtcaggggctggtaggtcaggggaagtgccaatcaaacagcaga 183
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 665 gaactgaagctgtggggtcaggggctggtaggtcaggggaagtgccaatcaagcagcaga 606
Query: 184 gtttcaaattcggaagacaaaatgtcagggagctactctgcgacactgttgacaatcaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 gtttcaaattcggaagacaaaatgtcagggagctactctgcgacactgttgacaatcaaa 546
Query: 244 agtgataccttccacacttattcatgaagagaactgatcttgtgttgagtacccctatgc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 agtgataccttccacacttattcatgaagagaactgatcttgtgttgagtacccctatgc 486
Query: 304 taataaaataaattctaaaagtagtttgcccaaggtcacaaaatttgaagtcagcaactg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 taataaaataaattctaaaagtagtttgcccaaggtcacaaaatttgaagtcagcaactg 426
Query: 364 ggagcagtctcacccatgaggagctcttgtgtctgccagttttcgtggtggtatcttcct 423
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 425 ggagcagtctcacccatgaggagctcttgtgtctgccagtttttgtggtggtatcttcct 366
Query: 424 cgtgctgaacatgaacctgggtcccagagcaaacatcaccctgacccacccatccctggc 483
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 365 cgtgctgaacatgaacctgggtcccagagcaaacatcacccccacccacccatccctggc 306
Query: 484 ttcttcttcctgccaagacactcactgaaatctggtggagtcactaaagccgggaagtat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ttcttcttcctgccaagacactcactgaaatctggtggagtcactaaagccgggaagtat 246
Query: 544 atttgtttaaattgtcaagataaattaacttttagagcccc 584
||||||||||||||||||||||||||||||||||| |||||
Sbjct: 245 atttgtttaaattgtcaagataaattaacttttagcgcccc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space: 568400
Effective search space used: 568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no278_g23.g1 MSMg01no278_g23.g1 CHROMAT_FILE:
MSMg01no278_g23.g1 PHD_FILE: MSMg01no278_g23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:46 2005
(282 letters)
>mm_chr7_131723686_131724367
Length = 682
Score = 499 bits (258), Expect = e-146
Identities = 276/282 (97%)
Strand = Plus / Plus
Query: 1 acagattctgaactgaacccaaaacctgggttctttcttccctatcccaatgaaatcatc 60
|||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 201 acagattctgaactgagcccaaaacctgggttctgtcttccctatcagaatgaaatcatc 260
Query: 61 ttcctcctggctccttgtctctatgagtattgcatccaagacaggaatgccaatcacctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcctcctggctccttgtctctatgagtattgcatccaagacaggaatgccaatcacctt 320
Query: 121 ctgagactcagagggaaagtatcagatgtgttgatttcagctactcttctttctttaata 180
|||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 ctgagactcagagggaaaatatcagatgtgttgatttcagctactcttccttctttaata 380
Query: 181 attcagaatagtttttgtctgaatgtatctgacttagttgtacaaattaagtgttcattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attcagaatagtttttgtctgaatgtatctgacttagttgtacaaattaagtgttcattc 440
Query: 241 ccagtgctgcttcaaccccagaaggctctgtctgaacctttc 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccagtgctgcttcaaccccagaaggctctgtctgaacctttc 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
