Query= MSMg01no279_p02.b1 MSMg01no279_p02.b1 CHROMAT_FILE:
MSMg01no279_p02.b1 PHD_FILE: MSMg01no279_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:40 2005
(247 letters)
>mm_chr7_107694650_107695297
Length = 648
Score = 426 bits (220), Expect = e-124
Identities = 241/248 (97%), Gaps = 1/248 (0%)
Strand = Plus / Minus
Query: 1 gcaggagaagatggttccctacttccctgcagccttaatgcctggctggaccagaggagg 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 448 gcaggagaagatggttccctacttccctgcagccttaatgcctggctggagcagaggagg 389
Query: 61 gagccctggctttctctgcagaggagatgtatacaatttcagtttggattcactccagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gagccctggctttctctgcagaggagatgtatacaatttcagtttggattcactccagtt 329
Query: 121 ctcttcgggtttctaaagtcagcagctcaaggatgcagtctggccacttcactgcgggtg 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ctctttgggtttctaaagtcagcagctcaaggatgcagtctggccacttcactgcgggtg 269
Query: 181 gttaggagggaagaggaccttactcatctagcaaagtgcactacagtgcatctttatacc 240
| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 268 ggcaggagggaagaggaccttactcatctagcaaaatgcactacagtgcgtctttatacc 209
Query: 241 a-gcacaa 247
| ||||||
Sbjct: 208 aagcacaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 648
Length adjustment: 9
Effective length of query: 238
Effective length of database: 639
Effective search space: 152082
Effective search space used: 152082
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no279_p02.g1 MSMg01no279_p02.g1 CHROMAT_FILE:
MSMg01no279_p02.g1 PHD_FILE: MSMg01no279_p02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:40 2005
(289 letters)
>mm_chr7_107522437_107523125
Length = 689
Score = 532 bits (275), Expect = e-155
Identities = 288/295 (97%), Gaps = 6/295 (2%)
Strand = Plus / Plus
Query: 1 cagacaagccaggattacctagtaagatgtctaataaaaag-----aaaaaaaaaagaaa 55
|||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 195 cagacaagccaggattacctagtaagatgtctaaaaaaaagaaaaaaaaaaaaaaagaaa 254
Query: 56 gaaagaaaaag-aaaaaaaagcagaaaattctgttttccatagttggaccagattttgac 114
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gaaagaaaaagaaaaaaaaagcagaaaattctgttttccatagttggaccagattttgac 314
Query: 115 tgagtgtgttgtattcctcgtaggtttgagtgacatttcaccgtctacaagcctgccacc 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tgagtgtgttgtattcctcgtaggtttgagtgacatttcaccgtctacaagcctgccacc 374
Query: 175 tctggttgaagggcagttacgctgctttctcaaactcactattaataaggttgtatggaa 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tctggttgaagggcagttacgctgctttctcaaactcactattaataaggttgtatggaa 434
Query: 235 gattgcgaagcctcctacttctgtacttgtccgagtaaggtggtggggagaaaca 289
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gattgcgaagcctcctacttctgtacttgtccgagtaaggtggtggggagaaaca 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
