Query= MSMg01no279_p18.b1 MSMg01no279_p18.b1 CHROMAT_FILE:
MSMg01no279_p18.b1 PHD_FILE: MSMg01no279_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:43 2005
(327 letters)
>mm_chr7_142787811_142788536
Length = 726
Score = 542 bits (280), Expect = e-158
Identities = 304/314 (96%), Gaps = 5/314 (1%)
Strand = Plus / Minus
Query: 16 ggaattcaggagc--tctgccagttcagttttagtctcttcagaggcaccgatgctctca 73
||||||||||||| | |||||||||| || ||||||||||||||||||||||||||
Sbjct: 526 ggaattcaggagcaa---ggcagttcagttctattctcttcagaggcaccgatgctctca 470
Query: 74 gcttcaggtgaatgccaatgattcgctcatttcttggtgcagggcacacagactttcccg 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gcttcaggtgaatgccaatgattcgctcatttcttggtgcagggcacacagactttcccg 410
Query: 134 gtagtgatacagcggcagtcactgtcacgacttggacctgtgtggttgttggttgttgtt 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gtagtgatacagcggcagtcactgtcacgacttggacctgtgtggttgttggttgttgtt 350
Query: 194 tttttcccatttttatatctcccccccacccccaggagctgcttccttgtgggctcctgt 253
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tttttcccatttttatctctcccccccacccccaggagctgcttccttgtgggctcctgt 290
Query: 254 ccttgaacagctttgtcaagcttcttagagaggcatcccaacaagggccacttcagcctc 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ccttgaacagctttgtcaagcttcttagagaggcatcccaacaagggccacttcagcctc 230
Query: 314 tcaggactcccagg 327
||||||||| ||||
Sbjct: 229 tcaggactctcagg 216
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 726
Length adjustment: 9
Effective length of query: 318
Effective length of database: 717
Effective search space: 228006
Effective search space used: 228006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no279_p18.g1 MSMg01no279_p18.g1 CHROMAT_FILE:
MSMg01no279_p18.g1 PHD_FILE: MSMg01no279_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:43 2005
(287 letters)
>mm_chr7_142642663_142643349
Length = 687
Score = 530 bits (274), Expect = e-155
Identities = 280/282 (99%)
Strand = Plus / Plus
Query: 1 cctgctctcagggagaatctccagtgtctctgaaagtcgctgagcctagcagactcgttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgctctcagggagaatctccagtgtctctgaaagtcgctgagcctagcagactcgttc 260
Query: 61 ctaggagcactccatacccagtgaaagacattggcttttcctactaatctcactccagat 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaggagcactccatacccagtgaaagacattggcttttcctactaatctcactccagat 320
Query: 121 caatagtgtgaaaaagaagacaggaggtaaaagaatgtttcttgctttagaaaatacctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caatagtgtgaaaaagaagacaggaggtaaaagaatgtttcttgctttagaaaatacctg 380
Query: 181 aacatcaggactgagtagatggctcagtgagtgagagcacttgttatgaaaacatgggga 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 aacatcaggactgagtagatggctcagtgagtgagagcactcgttatgaaaacatgggga 440
Query: 241 cctgagttcaaatccccagatacatcccacatgtctgttgct 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctgagttcaaatccccagatacatcccacatgtctgttgct 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
