CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCAGGACAATCCCAGCCACATAAAGAAACCCTTTCTTGAAAAAAACA
CAAAATCACTGTAATATATCTGGGTTTATCATCCCACCTCCTTCAGCCCT
CAGCATGACATAGAGGATACTAAGGCATTGATGGGGCACATATAAAAGGG
CACAATGAAGACAATTCCATGTAACAGGCAAGAGTGTGGAGTTCTGAAGT
TCAGCTCCAGTGCTCCTAGGCAAGTCCACCTCTTCAGGAAGCCACGGAAA
GTCAAAAATTAAACCTTCAATTGCCATGATTTCCACAAGGGGGCCAGGGA
GGCCGGAAACAGTTCAGAATTCTCCAAGAACTGCTAGACATGGCTCACTG
TAGGATGAGCCTGAGACCAAGCCATTTGCTCCTAACCACTCACAGGTTAG
CAGCTGTAGGCTTCTTCGAATGTAACGAATAGAAATAGAAGCTGAACAAC
CAAAGTAGAATTTCAGATGAACAGCGAACAGCTTTAGAATATGTACATCA
TATGACAGACTTGGGTTTCGGTGGACAGGTATTCCAAAGAAAAGTTCTTG
GCTGTATTGAGGAAGCCACTCTATTCTGTCCATCAAAGTCTCAACTCAAC
AGATGGAGACAACATATTTGAGATTTGCCTAGTCCTACGGTTGAGTCTGC
TCTGCCACAGGGCTCAGCCTCTTGGGGAG

CGAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAATAAAATCAGATGCTTTTCCAC
ATATCTGAATTTATAATTTAACTCTCTTAGTAGACAGAAATATGTTTTTC
CAGGAGTCTGACACAGAAGCCTTAGTTGGAGATCCTATTGTTGTGATAAA
AACACCAGGATCAAAAGCAGCTCGGGAGGAAGGAGCTGTATTTCAGTCTG
TAGCTCTCAGGTCAGAGCCCATCATTTAAGGAAATCAGGACAGGAACTCA
AGGCAGGAAACTGGAGGCAGGAACTAGAGCAGAGGCCCGGGAGGAGTGCT
GAATGCTAGCTTATTCTCTTGGTTTGCTCACTCTGCACTCTTGTAGCATC
TAGGACTACAGCGATGGCACCGCCCACAGTGAGCCAGATCAGCCAAAAAT
GCACTTCAGACTTACCCACGAGACAATCTGGTTGGGGGCATTCTCTCAGT
TGAGGTTCCCTCTTCTAAAATGACCATAGATTGGGGCAAGTTGACATTAA
GCTAGCTAACACATACAGTAACAGTGTCTAGGCAACCACATGAGTGTTCT
CATCCCCTCTCCCCTTTTGTGGTTCTCCCCTCACCCCTTTTGTGGTCCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCCATAAGTTGGTGTCCAGTGTTTTTTCT

Query= MSMg01no280_a11.b1 MSMg01no280_a11.b1 CHROMAT_FILE:
MSMg01no280_a11.b1 PHD_FILE: MSMg01no280_a11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:47 2005
         (637 letters)



>mm_chr7_97401069_97402105
          Length = 1037

 Score = 1195 bits (618), Expect = 0.0
 Identities = 630/634 (99%), Gaps = 1/634 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccaggacaatcccagccacataaagaaaccctttcttg-aaaaaaacacaaaatc 63
           ||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 895 gaattccaggacaatcagagccacataaagaaaccctttcttgaaaaaaaacacaaaatc 836

                                                                       
Query: 64  actgtaatatatctgggtttatcatcccacctccttcagccctcagcatgacatagagga 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 actgtaatatatctgggtttatcatcccacctccttcagccctcagcatgacatagagga 776

                                                                       
Query: 124 tactaaggcattgatggggcacatataaaagggcacaatgaagacaattccatgtaacag 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 tactaaggcattgatggggcacatataaaagggcacaatgaagacaattccatgtaacag 716

                                                                       
Query: 184 gcaagagtgtggagttctgaagttcagctccagtgctcctaggcaagtccacctcttcag 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 gcaagagtgtggagttctgaagttcagctccagtgctcctaggcaagtccacctcttcag 656

                                                                       
Query: 244 gaagccacggaaagtcaaaaattaaaccttcaattgccatgatttccacaagggggccag 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gaagccacggaaagtcaaaaattaaaccttcaattgccatgatttccacaagggggccag 596

                                                                       
Query: 304 ggaggccggaaacagttcagaattctccaagaactgctagacatggctcactgtaggatg 363
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 595 ggaggccggaaacagttcagaattctccaagaactgccagacatggctcactgtaggatg 536

                                                                       
Query: 364 agcctgagaccaagccatttgctcctaaccactcacaggttagcagctgtaggcttcttc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 agcctgagaccaagccatttgctcctaaccactcacaggttagcagctgtaggcttcttc 476

                                                                       
Query: 424 gaatgtaacgaatagaaatagaagctgaacaaccaaagtagaatttcagatgaacagcga 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gaatgtaacgaatagaaatagaagctgaacaaccaaagtagaatttcagatgaacagcga 416

                                                                       
Query: 484 acagctttagaatatgtacatcatatgacagacttgggtttcggtggacaggtattccaa 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 acagctttagaatatgtacatcatatgacagacttgggtttcggtggacaggtattccaa 356

                                                                       
Query: 544 agaaaagttcttggctgtattgaggaagccactctattctgtccatcaaagtctcaactc 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 agaaaagttcttggctgtattgaggaagccactctattctgtccatcaaagtctcaactc 296

                                             
Query: 604 aacagatggagacaacatatttgagatttgccta 637
           ||||||||||||||||||||||||||||||||||
Sbjct: 295 aacagatggagacaacatatttgagatttgccta 262


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space:   643929
Effective search space used:   643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)