Query= MSMg01no288_c12.b1 MSMg01no288_c12.b1 CHROMAT_FILE:
MSMg01no288_c12.b1 PHD_FILE: MSMg01no288_c12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:10 2005
(315 letters)
>mm_chr7_56629898_56630612
Length = 715
Score = 563 bits (291), Expect = e-165
Identities = 306/311 (98%)
Strand = Plus / Plus
Query: 4 ggaattccaggggtagtgccatggggcacaagagacatgacattgcatcctaatggcctg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccaggggtagtgccatggggcacaagagacatgacattgcatcctaatggcctg 263
Query: 64 ttggtcagcaaacagtcacaaagtgtctcctggtgagctacggcaggtgagtagcaagca 123
| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 264 tcggtcagcaaacagtcacaaagtgtctcctggtgagctacggcaggtgagtaacaagca 323
Query: 124 gcaagaagtggtctctcctcacaggacagtcaggtgtgtgggcaagagaccagaggacag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcaagaagtggtctctcctcacaggacagtcaggtgtgtgggcaagagaccagaggacag 383
Query: 184 gacgctaggactcgggagcccacccttcccccaggaaggtcatatctgaggcctcaagtg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gacgctaggactcgggagcccacccttcccccaggaaggtcatatctgaggcctcaagtg 443
Query: 244 tctgcccttgtcctgctgttctgtggtaaaaggtttggcttggaagagcccagggtatgg 303
||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 444 tctgctcttgtcctgctgttctgtggtaaaaggcatggcttggaagagcccagggtatgg 503
Query: 304 cagaactcata 314
|||||||||||
Sbjct: 504 cagaactcata 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no288_c12.g1 MSMg01no288_c12.g1 CHROMAT_FILE:
MSMg01no288_c12.g1 PHD_FILE: MSMg01no288_c12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:10 2005
(288 letters)
>mm_chr7_56808670_56809357
Length = 688
Score = 511 bits (264), Expect = e-149
Identities = 279/288 (96%), Gaps = 8/288 (2%)
Strand = Plus / Minus
Query: 1 atgtgtgatgaagtaaattccaggtccctctcaatgtctccttgttcctgcccagcaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 atgtgtgatgaagtaaattccaggtccctctcaatgtctccttgttcctgcccagcaagg 425
Query: 61 gcgtcgccagaagctgagccctgggcaggagcctgggcatgctggaacttgctgactgat 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 424 gcgtcgccagaagctgagccctgggcaggagcctgggcatgctggaacttgctggctgat 365
Query: 121 agagtcaaggcatctgaatgtctaaagtgcaggggcttggtgtctaagtctgacagaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 agagtcaaggcatctgaatgtctaaagtgcaggggcttggtgtctaagtctgacagaaac 305
Query: 181 aaagtttgtgctgtggatggggtgaagggggtttccattaattttttctccccctaagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aaagtttgtgctgtggatggggtgaagggggtttccattaattttttctccccctaagca 245
Query: 241 tgaaac----tttttctgcttgttatgtttggccaagccaccactcct 284
|||||| ||||||||||||||||||||||||||||||||||
Sbjct: 244 tgaaacaaca----tctgcttgttatgtttggccaagccaccactcct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
