Query= MSMg01no288_o22.b1 MSMg01no288_o22.b1 CHROMAT_FILE:
MSMg01no288_o22.b1 PHD_FILE: MSMg01no288_o22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:08 2005
(516 letters)
>mm_chr7_74397190_74398103
Length = 914
Score = 922 bits (477), Expect = 0.0
Identities = 499/507 (98%), Gaps = 2/507 (0%)
Strand = Plus / Minus
Query: 7 attcttttctcccattttaaagttttttctccaagtgacttatttgtttagtccatgttg 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 attcttttctcccattttaaagttttttctccaagtgacttatttgtttagtccatgttg 652
Query: 67 gttaactttgttgtatgagtcttcagttgagtttgtagtttccttttctttcaagtccct 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gttaactttgttgtatgagtcttcagttgagtttgtagtttccttttctttcaagtccct 592
Query: 127 tgttggtcatttgactctgtgatcactgacaggtgttgtaggtacgactcctctcctctc 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tgttggtcatttgactctgtgatcactgacaggtgttgtaggtacgactcctctcctctc 532
Query: 187 agctgccgtccttccctggagctaagaagctatggctcagttctatgcctgtgctgttgt 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 agctgccgtccttccctggagctaagaagctatggctcagttctatgcctgtgctgttgt 472
Query: 247 tgtgtctgtgatgtgtttatgcatctgtgttatttgtgttccgcttcatggtttctatcc 306
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 471 tgtgtctgtgatgtgtttatgcatctgtgggatttgtgttccgcttcatggtttctatcc 412
Query: 307 ccttttccttctgtttgtgagttctcttgttctgtcgtcttcctttgattctatgatggg 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ccttttccttctgtttgtgagttctcttgttctgtcgtcttcctttgattctatgatggg 352
Query: 367 acaactgactgcagaagcaactgtgatagttgacacagtccgtattgtcagctgcagaag 426
| |||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 351 agaactgactgcagtagcaactgtga--gttgacacagtccgcattgtcagctgcagaag 294
Query: 427 acactgcacccttccccatgtcccttctgtaaggtgggaactgtactaagttgaagaacg 486
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 293 acactgcacccttccccatgtcccttctgtaaggtgggaactgtactaagttggagaacg 234
Query: 487 ttgtttatttgttgggattttgttttg 513
|||||||||||||||||||||||||||
Sbjct: 233 ttgtttatttgttgggattttgttttg 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 914
Length adjustment: 10
Effective length of query: 506
Effective length of database: 904
Effective search space: 457424
Effective search space used: 457424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no288_o22.g1 MSMg01no288_o22.g1 CHROMAT_FILE:
MSMg01no288_o22.g1 PHD_FILE: MSMg01no288_o22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:08 2005
(284 letters)
>mm_chr7_74361320_74362003
Length = 684
Score = 542 bits (280), Expect = e-158
Identities = 283/284 (99%)
Strand = Plus / Plus
Query: 1 tcctgccaggatcccaaagatggacttgggtgtcactgggttttctgttcctcttcctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctgccaggatcccaaagatggacttgggtgtcactgggttttctgttcctcttcctgt 260
Query: 61 gttgtgctgaatcgaataaatcctccctctctgctttgtagcatcctgagtctctttcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttgtgctgaatcgaataaatcctccctctctgctttgtagcatcctgagtctctttcat 320
Query: 121 tgacttattgaggataagtggccagccctggcttgttcggccccatccaagttctgagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgacttattgaggataagtggccagccctggcttgttcggccccatccaagttctgagca 380
Query: 181 atctaacactgggtatgttttgtgtgtgcacagatacatgggcttgatagctgtttcagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atctaacactgggtatgttttgtgtgtgcacagatacatgggcttgatagctgtttcagg 440
Query: 241 gtaggaacagttggcatgggtactttgcgagtttgctcctatgt 284
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataggaacagttggcatgggtactttgcgagtttgctcctatgt 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
