Query= MSMg01no289_l06.b1 MSMg01no289_l06.b1 CHROMAT_FILE:
MSMg01no289_l06.b1 PHD_FILE: MSMg01no289_l06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:04 2005
(320 letters)
>mm_chr7_123050727_123051447
Length = 721
Score = 598 bits (309), Expect = e-175
Identities = 315/317 (99%), Gaps = 1/317 (0%)
Strand = Plus / Plus
Query: 5 gaattctctccaaccctgacctgcagcttttcc-atacagtggtttaagattctttcaca 63
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 205 gaattctctccaaccctgacctgcagcttttccaatacagtggtttaagattctttcaca 264
Query: 64 ctgagttgctctctgcaccactggttcatctaatgtgctgcagctctcatacttcagcaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgagttgctctctgcaccactggttcatctaatgtgctgcagctctcatacttcagcaa 324
Query: 124 tggcactaatggtctcaatagagaccaacttctgtattagtcaaggttctctagagtcac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tggcactaatggtctcaatagagaccaacttctgtattagtcaaggttctctagagtcac 384
Query: 184 agaacttatggatagtctctagatagtaaaggaatttattgatgacttacagtcggcagc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agaacttatggatagtctctagatagtaaaggaatttattgatgacttacagtcggcagc 444
Query: 244 ccaattcccaacaattgttcagtcgcagctgtgaatggaagtccaaggatctagcagtta 303
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccaatccccaacaattgttcagtcgcagctgtgaatggaagtccaaggatctagcagtta 504
Query: 304 ctcagtctcacacagca 320
|||||||||||||||||
Sbjct: 505 ctcagtctcacacagca 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 721
Length adjustment: 9
Effective length of query: 311
Effective length of database: 712
Effective search space: 221432
Effective search space used: 221432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no289_l06.g1 MSMg01no289_l06.g1 CHROMAT_FILE:
MSMg01no289_l06.g1 PHD_FILE: MSMg01no289_l06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:04 2005
(289 letters)
>mm_chr7_123207151_123207839
Length = 689
Score = 559 bits (289), Expect = e-164
Identities = 289/289 (100%)
Strand = Plus / Minus
Query: 1 ttttgacgttgtagccattggcagtaagttatagcggatcatagcagagcaggatccgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ttttgacgttgtagccattggcagtaagttatagcggatcatagcagagcaggatccgct 430
Query: 61 cttcagatgcttacaataactatgcatctatttgtatgtataagtagacaagaagacctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cttcagatgcttacaataactatgcatctatttgtatgtataagtagacaagaagacctt 370
Query: 121 gcttttcccttatatgttatatgaaaccctttacatttcatgtatggataaagacattga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gcttttcccttatatgttatatgaaaccctttacatttcatgtatggataaagacattga 310
Query: 181 aatatatagttaaggttctgagagaggtaaaactcaaagaccaatgtgggaggcaaagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aatatatagttaaggttctgagagaggtaaaactcaaagaccaatgtgggaggcaaagga 250
Query: 241 gagcaatgtgctagacacgctttccagagcatctaagctaagccttggg 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gagcaatgtgctagacacgctttccagagcatctaagctaagccttggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
