Query= MSMg01no290_g22.b1 MSMg01no290_g22.b1 CHROMAT_FILE:
MSMg01no290_g22.b1 PHD_FILE: MSMg01no290_g22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:59 2005
(239 letters)
>mm_chr7_149493299_149493937
Length = 639
Score = 331 bits (171), Expect = 3e-95
Identities = 183/187 (97%)
Strand = Plus / Minus
Query: 1 ccatgtctgaactaacatacataacatccttatgaccatgagatgaaatcctacagcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ccatgtctgaactaacatacataacatccttatgaccatgagatgaaatcctacagcaca 328
Query: 61 caccacagacccctaggcttccctagtcccagagctaaggatgcccccaggtaacacctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 caccacagacccctaggcttccctagtcccagagctaaggatgcccccaggtaacacctg 268
Query: 121 aacctacagcagaagtgttcctgattggctgggactacagcagaagtgtccctgattggc 180
|||||||||||||||||| |||||||||||||||||||||||||||| | |||| |||||
Sbjct: 267 aacctacagcagaagtgtccctgattggctgggactacagcagaagtcttcctggttggc 208
Query: 181 tgggact 187
|||||||
Sbjct: 207 tgggact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no290_g22.g1 MSMg01no290_g22.g1 CHROMAT_FILE:
MSMg01no290_g22.g1 PHD_FILE: MSMg01no290_g22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:59 2005
(289 letters)
>mm_chr7_149325715_149326403
Length = 689
Score = 520 bits (269), Expect = e-152
Identities = 284/289 (98%), Gaps = 1/289 (0%)
Strand = Plus / Plus
Query: 1 acagtattgggtatattgattcatagtcatagactctctctacttctattcacattgact 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 201 acagtattgggtatattgattcatagtcatagactctctctacttctatttacatcgact 260
Query: 61 tcagcatttttttgttgtatttattgcacagttaaagattttgttacatttattcatatt 120
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcagcattgttttgttgtatttattgcacagttaaagattttgttacatttattcatatg 320
Query: 121 gttttcacagtagtttaatgaggggaaacccaaaatttccatctctgtactggctggttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttttcacagtagtttaatgaggggaaacccaaaatttccatctctgtactggctggttt 380
Query: 181 tttgtgtgtgtcaacttgacacaagctggaattatcacagagaaaggagcttcccttgag 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttt-tgtgtgtcaacttgacacaagctggaattatcacagagaaaggagcttcccttgag 439
Query: 241 gaaactcctctatgagattcagctgtaaggtattttcttaattggtgat 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gaaactcctctatgagattcagctgtaaggtattttcttaattggtgat 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
