Query= MSMg01no290_k14.b1 MSMg01no290_k14.b1 CHROMAT_FILE:
MSMg01no290_k14.b1 PHD_FILE: MSMg01no290_k14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:17 2005
(320 letters)
>mm_chr7_121693987_121694706
Length = 720
Score = 603 bits (312), Expect = e-177
Identities = 315/316 (99%)
Strand = Plus / Plus
Query: 5 gaattctctgcataatgcaatagagcatatggcagactatagaaggtctttgaggtatga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctgcataatgcaatagagcatatggcagactatagaaggtctttgaggtatga 264
Query: 65 cattttgtttttatcgatccaagggaagcccatttcaactgacctactggatactttact 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cattttgtttttattgatccaagggaagcccatttcaactgacctactggatactttact 324
Query: 125 cagtgataaagatgtagtccatcttccaagttctgtgattcatgttctctttcatagcag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cagtgataaagatgtagtccatcttccaagttctgtgattcatgttctctttcatagcag 384
Query: 185 aagtagtattttctagttggagatgacataataaactagaaggcaagagagctagactct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagtagtattttctagttggagatgacataataaactagaaggcaagagagctagactct 444
Query: 245 agctttacttaagtttgtcttgtttttcctttcctttctatgcatttcagtttctcatac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agctttacttaagtttgtcttgtttttcctttcctttctatgcatttcagtttctcatac 504
Query: 305 ttgttcctgaattttc 320
||||||||||||||||
Sbjct: 505 ttgttcctgaattttc 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no290_k14.g1 MSMg01no290_k14.g1 CHROMAT_FILE:
MSMg01no290_k14.g1 PHD_FILE: MSMg01no290_k14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:17 2005
(481 letters)
>mm_chr7_121847927_121848806
Length = 880
Score = 891 bits (461), Expect = 0.0
Identities = 476/481 (98%), Gaps = 1/481 (0%)
Strand = Plus / Minus
Query: 1 tgcagaaggaagctgtgatgtccatcctagtgtcagagagaattttgctctcagatgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 643 tgcagaaggaagctgtgatgtccatcctagtgtcagagagaattttgct-tcagatgatg 585
Query: 61 aattcccaaaactatcagctgttagaagcacagggatcaagaatccatacggcaaggatc 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 584 aattcccaaaactatcagctgttagaagcacagggatcaagaatccatatggcaaggatc 525
Query: 121 catctcaagtaacagattacagaactgactacaacagccaaacaaaatgttgagggaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 catctcaagtaacagattacagaactgactacaacagccaaacaaaatgttgagggaata 465
Query: 181 agttttccattcccaatatggatggttaaatgtagtattttggagctctgacttgatata 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 464 agttttccattcccaatatggatggttaaatgtagaattttggagctctgacttgattta 405
Query: 241 gacttgagaaaaagggagctagtttgtcagtgaagacaaacatggagattttggactatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gacttgagaaaaagggagctagtttgtcagtgaagacaaacatggagattttggactatg 345
Query: 301 tgttcagttatatacaagagcctggttcccagttgtaattattggcaattaatggtctgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tgttcagttatatacaagagcctggttcccagttgtaattattggcaattaatggtctgc 285
Query: 361 aaacagaagttctaaagagcgagcccagtggtagctgagctggcaagtggccaaatgacc 420
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 aaacagaagttctaaagagagagcccagtggtagctgagctggcaagtggccaaatgacc 225
Query: 421 atggacctgaaggtggtagatgactttgttttgttttgttttgttttgttttgttttgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 atggacctgaaggtggtagatgactttgttttgttttgttttgttttgttttgttttgtt 165
Query: 481 t 481
|
Sbjct: 164 t 164
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 880
Length adjustment: 10
Effective length of query: 471
Effective length of database: 870
Effective search space: 409770
Effective search space used: 409770
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
