ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCTCAAATGTGCGCCGTGCATAGACCTATTAGCTTTCAGGTTTGCAAA
GTGGGTAGAACTGAAGAGTTGCCCCTGACCTCTAGATGAGGCTTGTCTGG
ATGGATCTTTAAAGTCTGAGTCTCCTCCTCAGGTAATATTGCTTTCTTTA
GTCAGGGAATGTTTGATTCACAGGATGACTTCTGCAACTTAGCCTTTGAA
AGAGTGCCCATCGTTCAGTTGCTGTTCTGACTGGCCCTGTGGCAAAGCCT
TATGTTATTTAAAGCTCTCCCAGGACTCCTTACAGAATCAGGTATTGACC
TCTCAAACTGGGACTGAACATTGAAAGCCAGATTGAAAGACATGGCTAAT
TGAACCAGTATGCATGGAGTGGTACATAGCAATTATTCAGTGAGCTTAGG
TTCAAGATTCTCCTATTCACACATCCTCATTTGTCAATTCAGGAGACTTT
GCCTGCAGAGTAATTGCATTGTACCACTCCGTTGCTTGTGACATTTAGGA
TATGGGTTCAGACTCTCCTCCATTTTCCCAAGAGAAGCTATCTCTCTGTC
ATGTGAGCCATGAGGGGTAATTCATCTTCTCCACAGATATTGAGAAGGCT
TTCCTACTCAGGCCTACATAGCCAGAAACAGGAGCACCAGAACTTGGCAA
GTCTTATTTCCTCATGAATCTTGCCATGAAGCTAGGA

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTGAATTGGGTTGTTGGGGGGTGGGG
GGTGGGGTAGAAATTTTTTTCCTCTAAACAAAGATTAATATTTAGATATT
TATAATTTCCTTAAAAGTAAATCGCCACAAAAAATGTGAGAGGGGAAATA
TGAATAAAGAAAACTGTGTAACGCACACTGCCCTGTCTGGAGGCATTCCC
GCCGATGGTTTGATATACATTTGATATCATAGTTGCATAGACTGGAACCC
TGAACAGGTCTAAGAAGAAAATTTATTTTTACTATAAAACTGCCGGAGAT
TAAGGAGAGAAATTTGNAGTGGATTCCCAGGACAACCCCCCCGATTAGTT
TATTAATATGATTGTTCTTCTTCCCTCCCCTTTCCAAAAAAAAAAAAAAA
ATCTGGGGGGGGGGGGGGTGTTGTTCTTTCACATCTCCGAGCTCTGCCTA
CCACTTCAATTCGGAATGCTTTGTTATATTATTGAAGTACGATTCTCGCG
CTAGCCCATGACTTCATATTATCGACTACTTTTTATACTCCATTTTTTAA
ATTTTCCAACACTCTTTAATTTTTCATATCATTCGCTATCTCTTTTCTTT
ACTCTTTTTACCTTCTCTCTTTCTTTGTTCCTGTTCTCGTTTTTCTATTC
TTATTATTTTTATGTATGACCATCTTTTCAGTTATTTTTATTATGGCTCC
ATTGTGAAATTCTCTGTCCAGTTAATTTCGTTGACCGGACCCGATGGAAT
TCACCCATCATAN

Query= MSMg01no290_p02.b1 MSMg01no290_p02.b1 CHROMAT_FILE:
MSMg01no290_p02.b1 PHD_FILE: MSMg01no290_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:37 2005
         (625 letters)



>mm_chr7_63893252_63894276
          Length = 1025

 Score =  772 bits (399), Expect = 0.0
 Identities = 437/457 (95%), Gaps = 12/457 (2%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctcaaatgtgcgccgtgcatagacctattagctttcaggtttgcaaagtgggta 64
           |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 445 gaattcctcaaatgtgtgccgtgcatagacctattagcttccaggtttgcaaagtgggta 386

                                                                       
Query: 65  gaactgaagagttgcccctgacctctagatgaggcttgtctggatggatctttaaagtct 124
           |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 385 gaactgaagagttggccctgacctctagatgaggcttgtctggatgggtctttaaagtct 326

                                                                       
Query: 125 gagtctcctcctcaggtaatattgctttctttagtcagggaatgtttgattcacaggatg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gagtctcctcctcaggtaatattgctttctttagtcagggaatgtttgattcacaggatg 266

                                                                       
Query: 185 acttctgcaacttagcctttgaaagagtgcccatcgttcagttgctgttctgactggccc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 265 acttctgcaacttagcctttgaaagagtgcccatcgttcagttgctgttctgactggc-- 208

                                                                       
Query: 245 tgtggcaaagccttatgttatttaaagctctcccaggactccttacagaatcaggtattg 304
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ----------ccttatgttatttaaagctctcccaggactccttacagaatcaggtattg 158

                                                                       
Query: 305 acctctcaaactgggactgaacattgaaagccagattgaaagacatggctaattgaacca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 acctctcaaactgggactgaacattgaaagccagattgaaagacatggctaattgaacca 98

                                                                       
Query: 365 gtatgcatggagtggtacatagcaattattcagtgagcttaggttcaagattctcctatt 424
           |||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||| ||
Sbjct: 97  gtatgcatggagtggtgcatagcaattattcagtgagcttgggtgcaagattctcctgtt 38

                                                
Query: 425 cacacatcctcatttgtcaattcaggagactttgcct 461
           |||||||||||||||||||||||||||||||||||||
Sbjct: 37  cacacatcctcatttgtcaattcaggagactttgcct 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space:   624225
Effective search space used:   624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)