Query= MSMg01no294_l10.b1 MSMg01no294_l10.b1 CHROMAT_FILE:
MSMg01no294_l10.b1 PHD_FILE: MSMg01no294_l10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:27 2005
(317 letters)
>mm_chr7_100605687_100606403
Length = 717
Score = 567 bits (293), Expect = e-166
Identities = 308/313 (98%)
Strand = Plus / Plus
Query: 5 gaattcctagcatagcacaggctaggtgcctatgctcattaagacaggatcttaaatatt 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctagcatagcataggctaggtgcctatgctcattaagacaggatcttaaatatt 264
Query: 65 ttccccaggttggaccctcatctttactaagcagacaaagcataagtatttcacagtatt 124
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttccccaggtaggatgttcatctttactaagcagacaaagcataagtatttcacagtatt 324
Query: 125 ttgcttgtttccctctcttccctcctgctcttatcacatcacaccatgatttacaagcta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgcttgtttccctctcttccctcctgctcttatcacatcacaccatgatttacaagcta 384
Query: 185 atgctggcgttccctatctaagctgaggagaagtgaacaaatgctttgttaaatgaaact 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atgctggcgttccctatctaagctgaggagaagtgaacaaatgctttgttaaatgaaact 444
Query: 245 gatgcataacattgctaaaatgcccccaaagaaatattgtcaatatttacatataaaaca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gatgcataacattgctaaaatgcccccaaagaaatattgtcaatatttacatataaaaca 504
Query: 305 tcttaagctaata 317
|||||||||||||
Sbjct: 505 tcttaagctaata 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no294_l10.g1 MSMg01no294_l10.g1 CHROMAT_FILE:
MSMg01no294_l10.g1 PHD_FILE: MSMg01no294_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:27 2005
(291 letters)
>mm_chr7_100756567_100757257
Length = 691
Score = 530 bits (274), Expect = e-155
Identities = 286/290 (98%), Gaps = 2/290 (0%)
Strand = Plus / Minus
Query: 1 ttttcattatttacataaagatataataataatttctgatcaaccatgatgataaaagaa 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 590 ttttcattatttacataaagatataataataatttctgattaaccatgatgataaaagaa 531
Query: 61 attatgtcttattcataaatttatttaaattatttcacact-taaaatgtgcccaaaata 119
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 530 attatgtcttattcataaatttatttaaattatttcaca-tataaaatgtgcccaaaata 472
Query: 120 ttagaaagtctctagcttacaaaagaaatacaagctagaacctcctgctaccacgttaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 471 ttagaaagtctctagcttacaaaagaaatacaagctagaacctcctgctaccaagttaaa 412
Query: 180 ttcttacatgtagtttcaacttaattagaaataggagacgattattactgtaaccttaat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ttcttacatgtagtttcaacttaattagaaataggagacgattattactgtaaccttaat 352
Query: 240 caaactcgggaaacaactgagcagttattcacagggaaaagggcaagcag 289
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 caaactcgggaaacaactgagcagttattcacagggaaaagggcaagcag 302
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
