Query= MSMg01no294_p10.b1 MSMg01no294_p10.b1 CHROMAT_FILE:
MSMg01no294_p10.b1 PHD_FILE: MSMg01no294_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:45 2005
(277 letters)
>mm_chr7_142181455_142182131
Length = 677
Score = 472 bits (244), Expect = e-137
Identities = 262/272 (96%), Gaps = 7/272 (2%)
Strand = Plus / Minus
Query: 4 ggaattcagttgtctttattatcaggcagatgtgtgcacagcccctcttcttgggctgtg 63
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 382 ggaattcagttgtctttattatcaggcagatgtgtgcacagtccctcttcttgggctgtg 323
Query: 64 gcaaagagaggggaactttatttctcaaaatctacccatgtcttccttggccaattcaga 123
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gcaaagagaggggaattttatttctcaaaatctacccatgtcttccttggccaattcaga 263
Query: 124 ggcaatcactatgggccaatcccactgtgagatctgcttctcgggaagagctgggggggg 183
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 262 ggcaatcactatgggccaatcccactgtgagatctgcttctcgggaagagct-------g 210
Query: 184 ggggggagaaaggcagtctcggtgcagtgtccagtgggagggatgggaattctccatacc 243
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 209 ggggggagaaaggcagtctcggtgcactgtccagtgggagggatgggaattctccatacc 150
Query: 244 atatggagcttgggagaaaggaagtggaggaa 275
||||||||||||||||||||||||||||||||
Sbjct: 149 atatggagcttgggagaaaggaagtggaggaa 118
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space: 179024
Effective search space used: 179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no294_p10.g1 MSMg01no294_p10.g1 CHROMAT_FILE:
MSMg01no294_p10.g1 PHD_FILE: MSMg01no294_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:45 2005
(287 letters)
>mm_chr7_142020233_142020919
Length = 687
Score = 499 bits (258), Expect = e-146
Identities = 276/282 (97%)
Strand = Plus / Plus
Query: 6 gaagacatccaagtcagccagtcagtctacaggctcatttgcagccatgcttgctggctc 65
||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 206 gaagacacccaagtcatccagtcagtctacaggttcatttgcagccatgcttgctggctc 265
Query: 66 ctcatcttgctcacttgttctttgaggtatggaaggtttgaggcaagctttggtgaggac 125
|| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 266 cttatcttgctcacttgttctttgaggtatggatggtttgaggcaagctttggtgaggac 325
Query: 126 attgggatgaagggcacatggcctcacagaggtaggaatgacatcatcaaaggccgcctg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 attgggatgaagggcacatggcctcacagaggtaggaatgacatcatcaaaggccgcctg 385
Query: 186 cagcagtaattaataacgtgttgtcattggctaggtaaagactactgtgactccaagtgc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 cagcagtaattaataacgtgttgtcattggctaggtaaagactactgtgactccaagtgc 445
Query: 246 acatgtggaatgtgtcccgtctctcacccaggctttcatgac 287
|||||||||||||||||| |||||||||||||||||||||||
Sbjct: 446 acatgtggaatgtgtcccatctctcacccaggctttcatgac 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
