Query= MSMg01no295_d21.b1 MSMg01no295_d21.b1 CHROMAT_FILE:
MSMg01no295_d21.b1 PHD_FILE: MSMg01no295_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:07 2005
(294 letters)
>mm_chr7_135694377_135695069
Length = 693
Score = 524 bits (271), Expect = e-153
Identities = 289/295 (97%), Gaps = 3/295 (1%)
Strand = Plus / Minus
Query: 1 ctgactcagaccacagtaaaccagggaccatctgcagcccgggttgcttgctgcaactgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctgactcagaccacagtaaaccagggaccatctgcagcccgggttgcttgctgcaactgg 268
Query: 61 gagataggaaagaatcctgtaagatttcaattttatagattgaaaaaaataaaaaaacaa 120
||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 267 gagatagaaaagaatcctgtaagatttcacttttatagattgaaaaaaat-aaaaaacaa 209
Query: 121 aaagcaaaacacacacatacacacatacacacaccaaatcaaatgctctgagtttggaag 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 aaagcaaaacacatacatacacacatacacacaccaaatcaaatgctctgagtttggaag 149
Query: 181 aggttaagagattttcaaaattctgcagcccttaggaagtcctttgctgcttgattactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 aggttaagagattttcaaaattctgcagcccttaggaagtcctttgctgcttgattactg 89
Query: 241 tgatga-tatatcttgtctgcttgatgggattagaatcaccatggcaaccagcct 294
|||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 tgatgatta-atcttgtctgcttgatgggattagaatcaccatggcaaccagcct 35
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 693
Length adjustment: 9
Effective length of query: 285
Effective length of database: 684
Effective search space: 194940
Effective search space used: 194940
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no295_d21.g1 MSMg01no295_d21.g1 CHROMAT_FILE:
MSMg01no295_d21.g1 PHD_FILE: MSMg01no295_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:07 2005
(262 letters)
>mm_chr7_135532580_135533241
Length = 662
Score = 507 bits (262), Expect = e-148
Identities = 262/262 (100%)
Strand = Plus / Plus
Query: 1 gcccccacacctaatagagcttctgaggccaagtcttctgaaacaaaattgctaccctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcccccacacctaatagagcttctgaggccaagtcttctgaaacaaaattgctaccctga 260
Query: 61 ccgttcagaaacaatgaaagtggcaatccagcatgacccggggtcaccatgcgacccctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccgttcagaaacaatgaaagtggcaatccagcatgacccggggtcaccatgcgacccctc 320
Query: 121 ccagttcagagctcatggggatgttaccctgtcctgcagcggactgaaactcactggtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccagttcagagctcatggggatgttaccctgtcctgcagcggactgaaactcactggtca 380
Query: 181 atgctaaaacttaaatgagcctcgggactgttaagctacatgaggctgcatacggtatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgctaaaacttaaatgagcctcgggactgttaagctacatgaggctgcatacggtatca 440
Query: 241 tgctgttcacaggaatgtgcag 262
||||||||||||||||||||||
Sbjct: 441 tgctgttcacaggaatgtgcag 462
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 262
Length of database: 662
Length adjustment: 9
Effective length of query: 253
Effective length of database: 653
Effective search space: 165209
Effective search space used: 165209
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
