Query= MSMg01no295_j03.b1 MSMg01no295_j03.b1 CHROMAT_FILE:
MSMg01no295_j03.b1 PHD_FILE: MSMg01no295_j03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:32 2005
(319 letters)
>mm_chr7_86171576_86172297
Length = 722
Score = 545 bits (282), Expect = e-159
Identities = 308/318 (96%), Gaps = 3/318 (0%)
Strand = Plus / Minus
Query: 5 gaattccaggtagaaaaaaaccagcatatgggaaagaggaaatcgttactaagaatttca 64
|||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 522 gaattccaggtagagaaaaaccaacatatgggaaagaggaaatcattactaagaatttca 463
Query: 65 tccatagcattgaggcaagaggg---aaaaaacttgtattttacaagttcatggggtgca 121
||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 462 tccatagcattgaggaaagagggaaaaaaaaacttgtattttacaagtccatggggtgca 403
Query: 122 agttcaggggacaaagtgactcaaaacaaacactcaagtcagacatgacagaaaagtctc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 agttcaggggacaaagtgactcaaaacaaacactcaagtcagacatgacagaaaagtctc 343
Query: 182 agaacactaaacactagagtaaattctgaatttacaaaaagaaaaggcaggtcatgtcca 241
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 agaacactaaacactagagtaaattctgaatttacaaaaagaaaaggcaggtcatgtccg 283
Query: 242 cacaagggctgcattaaaatcagattgtagccgcaggaagcaataaggcacagtaagtaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 cacaagggctgcattaaaatcagattgtagccgcaggaagcaataaggcacagtaagtaa 223
Query: 302 cagcgcgtaaataacaca 319
| ||||||||||||||||
Sbjct: 222 cggcgcgtaaataacaca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 722
Length adjustment: 9
Effective length of query: 310
Effective length of database: 713
Effective search space: 221030
Effective search space used: 221030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no295_j03.g1 MSMg01no295_j03.g1 CHROMAT_FILE:
MSMg01no295_j03.g1 PHD_FILE: MSMg01no295_j03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:32 2005
(290 letters)
>mm_chr7_85995126_85995815
Length = 690
Score = 530 bits (274), Expect = e-155
Identities = 286/290 (98%)
Strand = Plus / Plus
Query: 1 cttaacctatctgcatcttgaccttccctcctagacgatgaggctaatgacacagatcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttaacctatctgcatcttgaccttccctcctagacgatgaggctaatgacacagatcat 260
Query: 61 ggggttgagggcagggagtaaaattcattatattcataatagtgttataattaggatgtg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agggttgagggcagggagtaaaattcattatattcataatagtgttataattaggatgtg 320
Query: 121 aaattcttagcactcagtctgaaagagctggttatgcagcaaaagccaatctcatgtgtt 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaattcttagcactcagtctaaaagagctggttatgcagcaaaagccaatctcatgtgtt 380
Query: 181 gcgcccaccttgtccggcaaggaaaaacgcaaaacggtcggattcttctcaacagcttta 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 gcgcccaccttgtccggcaaggaaaaacgcaacacggtcggattcttctcaacagcttta 440
Query: 241 ttgcaggaactcctcgatgctacgggaaccccggaaacccagggaggact 290
|||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgcaggaacacctcgatgctacgggaaccccggaaacccagggaggact 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
