Query= MSMg01no295_j20.b1 MSMg01no295_j20.b1 CHROMAT_FILE:
MSMg01no295_j20.b1 PHD_FILE: MSMg01no295_j20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:35 2005
(321 letters)
>mm_chr7_129450445_129451165
Length = 721
Score = 576 bits (298), Expect = e-169
Identities = 310/314 (98%), Gaps = 1/314 (0%)
Strand = Plus / Minus
Query: 5 gaattcacattcaatttccattccttccaacttcaggggagtaggggctcctcagataag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gaattcacattcaatttccattccttccaacttcaggggagtaggggctcctcagataag 337
Query: 65 agtcttcacccgagctctgcccctctctccctgcccacacatttcactgcgctctctcct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 agtcttcacccgagctctgcccctctctccctgcccacacatttcactgcgctctctcct 277
Query: 125 ctgctttcctcaggccccatccctactcagtctctctagttttcctctctcacttgactt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ctgctttcctcaggccccatccctactcagtctctctagttttcctctctcacttgactt 217
Query: 185 aacactcagtctgggccagcgagagggctcagtgggtaaaggtgcttgctgccaagtctg 244
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 216 aacactcagtctgggccagcgagagggctcagtggctaaaggtgcttgctgccaagtctg 157
Query: 245 atgacctgagttagacccctgagtcccacatggtata-ggagagaacaacccccacaaag 303
||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||
Sbjct: 156 atgacctgagttagacccctgggtcccacatggtagaaggagagaacaacccccacaaag 97
Query: 304 ttcccttctgattt 317
||||||||||||||
Sbjct: 96 ttcccttctgattt 83
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no295_j20.g1 MSMg01no295_j20.g1 CHROMAT_FILE:
MSMg01no295_j20.g1 PHD_FILE: MSMg01no295_j20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:35 2005
(290 letters)
>mm_chr7_129265191_129265880
Length = 690
Score = 536 bits (277), Expect = e-157
Identities = 286/289 (98%)
Strand = Plus / Plus
Query: 1 actctgtagaccaggctggcctcaaagtcacagagatgtgcctgcctctgcgtccccagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actctgtagaccaggctggcctcaaagtcacagagatgtgcctgcctctgcgtccccagt 260
Query: 61 gctgggattaaaggaatacagccctccacccccagaaaatatgctgtttttattagaaca 120
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 261 gctgggattaaaggaatacagccctccacccccagcaaatatgccgtttttattagaaca 320
Query: 121 aggagagtcctgtgggtccaacaccacaaagcgtggccaaagcagcatttgtcagaaaaa 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 aggagagtcctgtgggtccaacaccacaaagcatggccaaagcagcatttgtcagaaaaa 380
Query: 181 gtaaaatagagagcaagcagcccaaggagttaataagaacacaacaaacaatgagaacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaaaatagagagcaagcagcccaaggagttaataagaacacaacaaacaatgagaacaa 440
Query: 241 aataaaaacaatgaatgaggtaggcgtggcagtgcatgcctgtaccaga 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aataaaaacaatgaatgaggtaggcgtggcagtgcatgcctgtaccaga 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
