Query= MSMg01no296_a23.b1 MSMg01no296_a23.b1 CHROMAT_FILE:
MSMg01no296_a23.b1 PHD_FILE: MSMg01no296_a23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:09 2005
(290 letters)
>mm_chr7_29624813_29625502
Length = 690
Score = 514 bits (266), Expect = e-150
Identities = 284/290 (97%)
Strand = Plus / Plus
Query: 1 cactttccagactgatcctaggctaaggggagacaaggggtggatgaggcccccaggaca 60
|||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||
Sbjct: 201 cactttccagactgatcctaggctaaggggagacgaggggtggacgaggatcccaggaca 260
Query: 61 gaagggatcgacccacggttgtggagcagggaacaaagaagagaatttaccaggagttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagggatcgacccacggttgtggagcagggaacaaagaagagaatttaccaggagttgt 320
Query: 121 cctaaagacacagagcctctggccatcccaaaatacagcaggggctgtggaccatgtacc 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 cctaaagacacagagcctctggccatcccaaaatacagcaggggctgtagaccatgtacc 380
Query: 181 taatggggtgcccagggattctcctcaacacttgccagtctagaattatgatcccagcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taatggggtgcccagggattctcctcaacacttgccagtctagaattatgatcccagcca 440
Query: 241 tgacctcctttcctctctgtacccactgggagccatgactattccagctt 290
|||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 441 tgacctcctttcctctctgtacccacagggagccatgactattccagctt 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no296_a23.g1 MSMg01no296_a23.g1 CHROMAT_FILE:
MSMg01no296_a23.g1 PHD_FILE: MSMg01no296_a23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:09 2005
(584 letters)
>mm_chr7_29624814_29625797
Length = 984
Score = 1064 bits (550), Expect = 0.0
Identities = 577/588 (98%), Gaps = 4/588 (0%)
Strand = Plus / Plus
Query: 1 actttccagactgatcctaggctaaggggagacaaggggtggacgaggatcccaggacag 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 actttccagactgatcctaggctaaggggagacgaggggtggacgaggatcccaggacag 260
Query: 61 aagggatcgacccacggttgtggagcagggaacaaagaagagaatttaccaggagttgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagggatcgacccacggttgtggagcagggaacaaagaagagaatttaccaggagttgtc 320
Query: 121 ctaaagacacagagcctctggccatcccaaaatacagcaggggctgtggaccatgtacct 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 ctaaagacacagagcctctggccatcccaaaatacagcaggggctgtagaccatgtacct 380
Query: 181 aatggggtgcccagggattctcctcaacacttgccagtctagaattatgatcccagccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatggggtgcccagggattctcctcaacacttgccagtctagaattatgatcccagccat 440
Query: 241 gacctcctttcctctctgtacccacagggagccatgactattccagcttaccctgctggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacctcctttcctctctgtacccacagggagccatgactattccagcttaccctgctggg 500
Query: 301 gtaagtatctgctaggctgtgggcagtttcccacagagttggaccaatggtaagggaagt 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 gtaagtatctgctaggctgtgggcagtttcccacagagttggagtaatggtaagggaagc 560
Query: 361 ttggggacaaaggacgccgcattccttcatctttcttcccttctgtctatctattccaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttggggacaaaggacgccgcattccttcatctttcttcccttctgtctatctattccaga 620
Query: 421 gtcctgggtacaaccctccacagatgaacaccttgcctgtaagtgggaggcacatggtgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 621 gtcctgggtacaaccctccacagatgaacaccttgcctgtaagtgggaggcgcatggtgg 680
Query: 481 gctcatggagggatgaggacaatttggggttgggaaagggatgaagacatgttggataag 540
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 681 gctcatggagggatgaggacaatttggagttgggaaagggatgaagacatgttggataag 740
Query: 541 gtatttgtcaaatcttacacagtagaatccctttctt----cgcaggt 584
||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 741 gtatttgtcaaatcttacacagtagaatccctttctttcttcgcaggt 788
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space: 559076
Effective search space used: 559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
