Query= MSMg01no296_f21.b1 MSMg01no296_f21.b1 CHROMAT_FILE:
MSMg01no296_f21.b1 PHD_FILE: MSMg01no296_f21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:32 2005
(319 letters)
>mm_chr7_63345947_63346665
Length = 719
Score = 596 bits (308), Expect = e-175
Identities = 314/316 (99%)
Strand = Plus / Minus
Query: 4 ggaattccacaacacagcaggtttttcagatacacaactatctcctgaggtgatctgagc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ggaattccacaacacagcaggtttttcagatacacaactatctcctgaggtgatctgagc 460
Query: 64 cataactcacctaagcgtgcctctctggacagccaactccagtagaatggccaaagccaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 cataactcacctaagcgtgcctctctggacagccaactccagtagaatggccaaagccaa 400
Query: 124 gtgctgatcctgtagaggaactcctcctggccccttggtccctggtgttccatgaacatc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gtgctgatcctgtagaggaactcctcctggccccttggtccctggtgttccatgaacatc 340
Query: 184 tctgaaatgagagcaacaggaagactaggcaacatcagagaaagcagaaatgtttaaatc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tctgaaatgagagcaacaggaagactaggcaacatcagagaaagcagaaatgtttaaatc 280
Query: 244 ataccaaccccctagtaatatttactttcccatgtaaagaggcaagcactgctggaacat 303
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 279 ataccaaccccctagtaatatttactttcccatataaagaggcaagcactgctggaacat 220
Query: 304 gcatacagcactgcat 319
||| ||||||||||||
Sbjct: 219 gcagacagcactgcat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no296_f21.g1 MSMg01no296_f21.g1 CHROMAT_FILE:
MSMg01no296_f21.g1 PHD_FILE: MSMg01no296_f21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:32 2005
(315 letters)
>mm_chr7_63166800_63167515
Length = 716
Score = 542 bits (280), Expect = e-158
Identities = 302/310 (97%), Gaps = 3/310 (0%)
Strand = Plus / Plus
Query: 8 tgaactctagtgcccgagggcatagcatttcacaagactgccgtcattttagtactagtg 67
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 208 tgaactctagtacccgagggcatagtatttcacaagactgccgtcattttagtactagtg 267
Query: 68 attagtgattcaggtcctgaggtccaccattcactgaccagctggctgaattcaggaaaa 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 attagtgattcaggtcctgaggtccaccattcactgaccagctggctgaattcaggaaaa 327
Query: 128 atctctgcccaggtagtagatcttcatgagattcctagtggtagtgactgggctgctttc 187
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 328 atctctgcccaggtagtagattttcatgagattcctagtggtagtgactgggctgctttc 387
Query: 188 cgtcctggagatgtgttaacttcctagtactgaagcatctgat--ggacaggaagatttg 245
|||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 388 cgtcctggagatgtgttaccttcctagtactgaagcatctgatatggacaggaagatttg 447
Query: 246 tgccagccagaggccaagtggttcttatcacgtgaccaggctcactaaaacaccagcaac 305
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tgccagc-agaggccaagtggttcttatcacgtgaccaggctcactaaaacaccagcaac 506
Query: 306 taccctccca 315
| ||||||||
Sbjct: 507 tgccctccca 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 716
Length adjustment: 9
Effective length of query: 306
Effective length of database: 707
Effective search space: 216342
Effective search space used: 216342
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
