CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAAAATCCGCGGAA
TTCAAGGATAATTTACCCCATAGTAGTGAGTTTTGGGAGAGGGATTGTTT
TATAGTTAGACCCTAATTTAAAGCCAAACAAAAAGGAAAAAGGGAATTTT
TCATGTCAAAGTCTTACAAAGTTCTGAAATAGATAACAAGTATACTGTAC
AGTACAGTATTACTTAGTCTTTCTCATTTGGACTGACACTTCCCTGGTTG
CTTTTCTACCTACTCCATAACCGACCCTTGAGTCTCACTCATCTTTACTG
TCACAGTGGCCATGTTAGACTCCCAAGAGTCTTTCCAAAAGCGCTAGTCT
ACTCCAACAAAGTCAATGATGGCTTCTGACTCAGGTTTCAACCAGGACTG
CTCAGGGTAAGAGCACCATCTTTAGGACAGGTGCTCAAGGCCCTCACAGT
GATGATCTCTCTTCACAGTAAACTTGCCAAGCTGTCTGGCATTACCACCT
TAAAGTTAGTCATATGTGCTACCCCGTGTAACAGTGGTTCTTCATTATTT
ACCTCTCAGAGGAAAACTCATTACTGATTGTCAGTGATGTGTTTACCACC
ATGGCTGACACTCCCATGTTTCTTATCTGGGGTATCATACATCATGGTAC
AAAGATGACAAGCTTTTAAATCAAATTCTCTCACCTACTCTGTCACTTGC
TAACTGTGGGACTTTGCAAGTCACCTAACTCGATATTTTCAGCTCCAGTT
TTATCATTAAAAGACTTG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXTGGCATCTTTCCCGAAGAGCTTTATGGCCAGGAAACACTCCACTG
TCCATACCGTTTATTAATTGTCACAAAACTCAGTGAGAGCAAACCTTTGT
AATTCTATTATAGAAAGAAGAGAGACATGAAGCTGAGAGGGATCTTACTG
AGCCGTGTAGTCAGTAACATATTGCAGATACATTCCAGTCAGAGTCTTTC
ATCAGATCTGTTTAATTTGCTTCACCGTTTCTTTGCTGTGTGATGTTGGA
CAATTTGCTTCACTTTTCTGAACTTCAATCTCTTCCTCCATCAAATCTTT
ATAACCCCGCCCACCTGCGAGAGCTGTGGTAAGGGTTATCAAACCAATGA
AATGAAAGGGTTAGCGAAAACTTTAGATGTAGCAAGTATTCAGGGACTGG
GACTCTCTACTTGTATTGCTGTTATATTTGCAGTTATAATTCCTCCTATT
CTAATCATTTAAAATGTAAAGTTGTTAATGGGGGCATTGTTTATTATTAT
TATTATTATTAGTAGTAGTAGTATCATAGTCGTTCTACCAAGGATGATAA
TGTTGACATGTTGCTGTTTTTCAGCTTCCTATAAATCAGTATCCTGAAAC
CAGGACTCCATGAATATTATTGCCTCAATTGCACGTTTCCCTATCTGCAG
AACCAAACTTAAGAACACCCCCTCTCACCCATTACTGCTCTCTCATAGA

Query= MSMg01no296_l08.b1 MSMg01no296_l08.b1 CHROMAT_FILE:
MSMg01no296_l08.b1 PHD_FILE: MSMg01no296_l08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:58 2005
         (574 letters)



>mm_chr7_102674419_102675392
          Length = 974

 Score =  955 bits (494), Expect = 0.0
 Identities = 554/574 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtgagttttgggagagggattgttttatagttagaccctaatttaaagccaaacaaaaa 60
           |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 agtgagtttttggagagggattgttttatagttagaccctaattcaaagccaaacaaaaa 260

                                                                       
Query: 61  ggaaaaagggaatttttcatgtcaaagtcttacaaagttctgaaatagataacaagtata 120
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaaaaagggaatttttcacgtcaaagtcttacaaagttctgaaatagataacaagtata 320

                                                                       
Query: 121 ctgtacagtacagtattacttagtctttctcatttggactgacacttccctggttgcttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgtacagtacagtattacttagtctttctcatttggactgacacttccctggttgcttt 380

                                                                       
Query: 181 tctacctactccataaccgacccttgagtctcactcatctttactgtcacagtggccatg 240
           ||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| 
Sbjct: 381 tctacctactccataaccgacccctgagtctcactcgtctttactgtcacaatggccatt 440

                                                                       
Query: 241 ttagactcccaagagtctttccaaaagcgctagtctactccaacaaagtcaatgatggct 300
           |||||||||||||| ||||||||||||| |||||||||||||||| | | ||||||||||
Sbjct: 441 ttagactcccaagaatctttccaaaagcactagtctactccaacagactgaatgatggct 500

                                                                       
Query: 301 tctgactcaggtttcaaccaggactgctcagggtaagagcaccatctttaggacaggtgc 360
           |||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 501 tctgtctcaggtttcaaccaagactgatcagggtaagagcaccatctttaggacaggtgc 560

                                                                       
Query: 361 tcaaggccctcacagtgatgatctctcttcacagtaaacttgccaagctgtctggcatta 420
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 561 tcaaggccctcacagtgatgatctctcttcacagtaagcttgccaagctgtctggcatta 620

                                                                       
Query: 421 ccaccttaaagttagtcatatgtgctaccccgtgtaacagtggttcttcattatttacct 480
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 621 ccaccttaaagttagtcatatgtgctaccccatgtaacagtggttcttcattatttacct 680

                                                                       
Query: 481 ctcagaggaaaactcattactgattgtcagtgatgtgtttaccaccatggctgacactcc 540
           |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 681 ctcagaggaaaactcattactgattgtcagtgatgtgtttaccatcatggctgacacttc 740

                                             
Query: 541 catgtttcttatctggggtatcatacatcatggt 574
           ||||||||||||||||||||||| ||||||||||
Sbjct: 741 catgtttcttatctggggtatcaaacatcatggt 774


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space:   543696
Effective search space used:   543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no296_l08.g1 MSMg01no296_l08.g1 CHROMAT_FILE:
MSMg01no296_l08.g1 PHD_FILE: MSMg01no296_l08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:58 2005
         (290 letters)



>mm_chr7_102835182_102835871
          Length = 690

 Score =  530 bits (274), Expect = e-155
 Identities = 286/290 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tggcatctttcccgaagagctttatggccaggaaacactccactgtccataccgtttatt 60
           |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 399 tggcgtctttcccgaagagctttatggccaggaaacactccactgtccataacgtttatt 340

                                                                       
Query: 61  aattgtcacaaaactcagtgagagcaaacctttgtaattctattatagaaagaagagaga 120
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 339 aattgtcacaaaactcagtgagagaaaacctttgtaattctattatagaaagaagagaga 280

                                                                       
Query: 121 catgaagctgagagggatcttactgagccgtgtagtcagtaacatattgcagatacattc 180
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 279 catgaagctgagagggatcttactgagccgtgcagtcagtaacatattgcagatacattc 220

                                                                       
Query: 181 cagtcagagtctttcatcagatctgtttaatttgcttcaccgtttctttgctgtgtgatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 cagtcagagtctttcatcagatctgtttaatttgcttcaccgtttctttgctgtgtgatg 160

                                                             
Query: 241 ttggacaatttgcttcacttttctgaacttcaatctcttcctccatcaaa 290
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 ttggacaatttgcttcacttttctgaacttcaatctcttcctccatcaaa 110


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space:   191361
Effective search space used:   191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)