Query= MSMg01no296_p12.b1 MSMg01no296_p12.b1 CHROMAT_FILE:
MSMg01no296_p12.b1 PHD_FILE: MSMg01no296_p12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:18 2005
(633 letters)
>mm_chr7_70788593_70789622
Length = 1030
Score = 640 bits (331), Expect = 0.0
Identities = 351/359 (97%), Gaps = 3/359 (0%)
Strand = Plus / Minus
Query: 1 atcatatccctataaataatactattgtgggtggcttaatactttctcattctgggaacc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 356 atcatatccctataaataa---tattgtgggtggcttaatactttctcattctgggaacc 300
Query: 61 agtgaacgagtgaggctgtgagacgctcatgaagtagaaacttacctatataatttgtag 120
|||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 299 agtgaacgagggaggctgtgagacgctcatgaagtagaaacttgcctatataacttgtag 240
Query: 121 ttctccttcctgttactcttttaacatgttttctatttctaaattaaaatattttaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ttctccttcctgttactcttttaacatgttttctatttctaaattaaaatattttaaaaa 180
Query: 181 taaacacacttttctataacaaaagtggcaatattataaaaaatggtatagagatcaatg 240
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 179 taaacatacttttctataacaaaagtggcaatattatcaaaaatggtatagagatcaatg 120
Query: 241 taggtttatcaaaattctaataattgtttgttatcatataactataaaattaataaaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 taggtttatcaaaattctaataattgtttgttatcatataactataaaattaataaaatt 60
Query: 301 catatgaaaatataaaagccaaaaaagaaatgtgctggttaccataatatctggcttta 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 catatgaaaatataaaagccaaaaaagaaatgtgctggttaccataatatctggcttta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1030
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1020
Effective search space: 635460
Effective search space used: 635460
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no296_p12.g1 MSMg01no296_p12.g1 CHROMAT_FILE:
MSMg01no296_p12.g1 PHD_FILE: MSMg01no296_p12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:18 2005
(281 letters)
>mm_chr7_70631963_70632645
Length = 683
Score = 443 bits (229), Expect = e-129
Identities = 274/299 (91%), Gaps = 19/299 (6%)
Strand = Plus / Plus
Query: 1 taggagagaggcagaggcaggcggatttctgagtt-gtaggccagcctggtctacaaagt 59
|||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 186 taggagagaggcggaggcaggcggatttctgagttcg-aggccagcctggtctacaaagt 244
Query: 60 gagttccaggacagctagggctatacatagaaatcctgtcttgagaaaaccaaaaaaaaa 119
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 245 gagttccaggacagctagggctatatagagaaatcctgtcttgagaaaaccaaaaaaaaa 304
Query: 120 aaaaaaaaaaaa----------------gaatcctaggagatgtagctctgagcttcagg 163
|||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 305 aaaaaaaaaaaaaaaaaaaaaagaaaaagaatcctaggagatgtagctctgagcttcagg 364
Query: 164 acagatgaaccttaacagaggcctgctgtggtaacccaggtcattgcctgccccacc-tg 222
| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 365 atagatgaaccttaacagaggcctgctgtggtaacccaggtcattgcctgcccccccctg 424
Query: 223 gttttgatctcactctggagatccctactggttgattcttcctgagttccctcacatag 281
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 425 gttttgatctcactctggagatcccttctggttgattcttcctgagttccctcacatag 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 683
Length adjustment: 9
Effective length of query: 272
Effective length of database: 674
Effective search space: 183328
Effective search space used: 183328
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
