Query= MSMg01no297_i15.b1 MSMg01no297_i15.b1 CHROMAT_FILE:
MSMg01no297_i15.b1 PHD_FILE: MSMg01no297_i15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:00 2005
(644 letters)
>mm_chr7_109499868_109500911
Length = 1044
Score = 1203 bits (622), Expect = 0.0
Identities = 638/644 (99%), Gaps = 2/644 (0%)
Strand = Plus / Minus
Query: 1 tgagacgaggtcttgctatgcagcttagctaacccagaactcattatatagaccaggctg 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1000 tgagacgaggtcttgctatgtagcttagctaacccagaactcattatatagaccaggctg 941
Query: 61 gtctcaaactcaaaaggatctgcctacctctacctccagagtgctggaattacacgcgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940 gtctcaaactcaaaaggatctgcctacctctacctccagagtgctggaattacacgcgta 881
Query: 121 agccttattttttgagacagtctatcactgaaactgatgctcaccaattctgttgggcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 agccttattttttgagacagtctatcactgaaactgatgctcaccaattctgttgggcta 821
Query: 181 ggtggctagccagccccaggcatcctactgtttctgtttccccaagctggaattacaggt 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 820 ggtggctagccagccccaggcatcctactgtttctgtttccccaaactggaattacaggt 761
Query: 241 gtgaagtagaatcccagctttgtatgcttgtacaactggagttacataaaatatgtcaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 gtgaagtagaatcccagctttgtatgcttgtacaactggagttacataaaatatgtcaag 701
Query: 301 caaaaagaggtcacacatgggaaagatttaagacacctgttctaagtgactagacactga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 caaaaagaggtcacacatgggaaagatttaagacacctgttctaagtgactagacactga 641
Query: 361 ttcagtgtaagactctaacaatgacctgaactccctccacgtttacttgcatcactggta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 ttcagtgtaagactctaacaatgacctgaactccctccacgtttacttgcatcactggta 581
Query: 421 acatttaccacagtgctacaccacacagtgctacaactgtctttctaacattatgccgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 acatttaccacagtgctacaccacacagtgctacaactgtctttctaacattatgccgct 521
Query: 481 tgactgtgatctccacaaattaaggtcagcacatccctagcagcaaccaaagtctaattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 tgactgtgatctccacaaattaaggtcagcacatccctagcagcaaccaaagtctaattt 461
Query: 541 cttgataagatgctctgtaaaaaaaaaaaaaaaaaaatttaaagactaccttaatatatt 600
|||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||
Sbjct: 460 cttgataagatgctctgttaaaaaaaaaaaaaaaa--tttaaagacttccttaatatatt 403
Query: 601 aactctagggagaacaaaagaaaataactagaagcaaaaagaag 644
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 aactctagggagaacaaaagaaaataactagaagcaaaaagaag 359
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no297_i15.g1 MSMg01no297_i15.g1 CHROMAT_FILE:
MSMg01no297_i15.g1 PHD_FILE: MSMg01no297_i15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:00 2005
(661 letters)
>mm_chr7_109455339_109456399
Length = 1061
Score = 1255 bits (649), Expect = 0.0
Identities = 658/661 (99%)
Strand = Plus / Plus
Query: 1 tcgagaggaggggctgttggttgttggtcattcagggggttggttatgatttgttaagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcgagaggaggggctgttggttgttggtcattcagggggttggttatgatttgttaagag 260
Query: 61 ttgtgtttgttcaaagaagaaacaagaataaagaaagttggattcttcacagatctatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgtgtttgttcaaagaagaaacaagaataaagaaagttggattcttcacagatctatct 320
Query: 121 cctaccccctctctcctttttcctctcctatagtgatagggggtgaaactgggagtggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctaccccctctctcctttttcctctcctatagtgatagggggtgaaactgggagtggga 380
Query: 181 tagagagtgggaaaaagaagaacccacaaagtagtaaagaccaactatatatgttaagtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagagagtgggaaaaagaagaacccacaaagtagtaaagaccaactatatatgttaagtc 440
Query: 241 aatatccaaagacaaaatagaaattcagaaaagttaaattgtgtacaaagatcttgatat 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 aatatccaaagacaaaatagaaattcagaaaagttaaattgtgtacaaagatgttgatat 500
Query: 301 agaaactttttgttttcaatatagagtttttagccctggttatcttggaactcactctgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agaaactttttgttttcaatatagagtttttagccctggttatcttggaactcactctgt 560
Query: 361 aggccaggctggcctagaactcagagatctacctgcctctgcttcccaagtgctgggatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggccaggctggcctagaactcagagatctacctgcctctgcttcccaagtgctgggatt 620
Query: 421 ctaggcatgtgccaccacactgggcaagaaacttgaatactttcaacaggtatgcagctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctaggcatgtgccaccacactgggcaagaaacttgaatactttcaacaggtatgcagctt 680
Query: 481 gtatacaagggtaactttgtgctttgtgggatgcatcctagagtgggatacctttcaaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtatacaagggtaactttgtgctttgtgggatgcatcctagagtgggatacctttcaaca 740
Query: 541 acttgtgttcataaagcaataagagtatcacatcttctaaaactcttctggttttggtgg 600
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 741 acttgtgttcataaagcaataagagtgtcacatcttctaaaactcttctggttttggtgg 800
Query: 601 cctacagtctttggaatcttagaaatccatgaaagcagtaaaaggatgtgtttgtgtaga 660
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cctacggtctttggaatcttagaaatccatgaaagcagtaaaaggatgtgtttgtgtaga 860
Query: 661 a 661
|
Sbjct: 861 a 861
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space: 684201
Effective search space used: 684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
