Query= MSMg01no299_k21.b1 MSMg01no299_k21.b1 CHROMAT_FILE:
MSMg01no299_k21.b1 PHD_FILE: MSMg01no299_k21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:40 2005
(425 letters)
>mm_chr7_148468911_148469735
Length = 825
Score = 741 bits (383), Expect = 0.0
Identities = 416/429 (96%), Gaps = 5/429 (1%)
Strand = Plus / Plus
Query: 2 gaattctctctctc-tttccaagatttattta----tttgtttgtttgtttgtttattta 56
|||||||||||||| ||| |||||||||||| ||||||||||||||||||| ||||
Sbjct: 197 gaattctctctctctttttaaagatttatttatttgtttgtttgtttgtttgtttgttta 256
Query: 57 tttatttatttcatgtatgtgcgtaaactgtccctgtcttcagacacaccagaagacaac 116
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tttatttatttcatgtatgtgggtaaactgtccctgtcttcagacacaccagaagacaac 316
Query: 117 ttcagatgcccattacagattgtcttagtcagggtttttattcctgcacaaacatcatga 176
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ttcaggtgcccattacagattgtcttagtcagggtttttattcctgcacaaacatcatga 376
Query: 177 ccaagaagcaagttggggaggaaaggatttattcagcttacacttccatactgctgttga 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ccaagaagcaagttggggaggaaaggatttattcagcttacacttccatactgctgttga 436
Query: 237 tcaccaaaggacttaccaaatttagcttccagcctctcctgcttataaagatgggcatct 296
|||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 437 tcaccaaaggacttaccaaatttagcttccagcctctcctgcagataaagatggacatct 496
Query: 297 ctcatgggagcttatgaagcctcacgcccttcctgaggccagcaatcccagagatgcttt 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ctcatgggagcttatgaagcctcacgcccttcctgaggccagcaatcccagagatgcttt 556
Query: 357 ctgtctgccctttaccccctgttcacttcaaaatatcacggagcctagggtaggggtagg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ctgtctgccctttaccccctgttcacttcaaaatatcacggagcctagggtaggggtagg 616
Query: 417 gggtgaagg 425
|||||||||
Sbjct: 617 gggtgaagg 625
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no299_k21.g1 MSMg01no299_k21.g1 CHROMAT_FILE:
MSMg01no299_k21.g1 PHD_FILE: MSMg01no299_k21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:40 2005
(422 letters)
>mm_chr7_148659935_148660755
Length = 821
Score = 712 bits (368), Expect = 0.0
Identities = 408/426 (95%), Gaps = 9/426 (2%)
Strand = Plus / Minus
Query: 1 tctacgtaaagcagtctggtctggaacacttcgaaatcctgcctgtctcctggatgttgg 60
|||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 712 tctatgtaaagcagtctggtctgaaacacttcgaaatcctgcctgtctcctggatgttgg 653
Query: 61 gattaaaggcgtgcaatatcacgcccaggctctcagaagtttggaaggtggttttcttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 gattaaaggcgtgcaatatcacgcccaggctctcagaagtttggaaggtggttttcttca 593
Query: 121 agttgctggcctttgggaaacttctaagcatccttcccgtgggtgacacctcaagtctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 agttgctggcctttgggaaacttctaagcatccttcccgtgggtgacacctcaagtctct 533
Query: 181 tccctgtcgacccactctctatcctctatctgctttccgacctaacccttatgtacttcg 240
|||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 532 tccctgtcgacctactctctatcctctatctgctttccgacctaccccttatgtacttcg 473
Query: 241 aacctcgtgg----ttttttttaaaatgcaggacaggctttgttggcatcgtcttgtgct 296
|||||||||| ||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 472 aacctcgtgggcccttt-----aaaatgcaggacaggctttgtgggcatcgtcttgtgct 418
Query: 297 cactactatgactggcccccaaaatatacctctggccaccatgtcaacaccaacgtgttc 356
|||||||||||||| ||||||||||| |||||||||||||||||||||||||| | ||||
Sbjct: 417 cactactatgactgtcccccaaaatagacctctggccaccatgtcaacaccaaggggttc 358
Query: 357 tctttctctgcacaagccataagtcagtggggcttaatgagcagctattagatcagctct 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tctttctctgcacaagccataagtcagtggggcttaatgagcagctattagatcagctct 298
Query: 417 gatgag 422
||||||
Sbjct: 297 gatgag 292
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 821
Length adjustment: 9
Effective length of query: 413
Effective length of database: 812
Effective search space: 335356
Effective search space used: 335356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
