TTTTTATGGGGNNGGGGNNNNNNNNNNCANNNNNNNNNNNCTCCTCTNNN
NNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGCGCAGAGGAT
CCGCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNA
GTCGTTCCTGGNCGGGCCTTTTCTTTTTTGCTCATGGNATGAANNAGGCG
CATTTGGGAGTTCTGGCCTGGGTGAACCTCCATTAAACCCCACAAACCTG
GCCAAAAAAAACCGGCCGGCGGAAAGCCAGCCTACCCCTGGTACTTTAAA
GCACCGGGCACCGGCCTATGACCCCTCCCATTTCCAAAAAAAAAAGGCCG
GGACCCCCCGGTTTAAAAAATGGGACCGGGGTTTCAAAAACCCCGGCCCA
CGGGTTGTGTTTTTTCTTTCCTTTTNNNNNNAGAAAAATNCCTNNCCCCC
TGTGGCTCTTNNNTAGGNNNNNNNCCGACCGGGCGGTTNNCGNNNNNNNN
NNNGGGAAACANNANCTCCCCCCCCCCGGNCCGGGGGNNNNNNNNNNNNT
CCNNNNCCCNNNNNNNNNNNGGGGGCGGCGCGGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNGGGGCCCGCCGGGCCCGCCTGNGGGNNNN
NNGGAAAAAACTGGGAAAAAAAAAAAAAAAAGGGAGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXAAAGGTGAAATGACTCCCCCCAGACAGACCTT
GCCTGGTCTTGTTTCCTCCAATCAAGTTACTGATGGAGATTTTTTTAAAA
AAATAAAAATAAAAGGAGACAGGCCAAGCTGGGACCTCCTCATGGGTCAG
AGTCTGGGAGCCTCCCTCGAGGGCAGAAATCAGAGGTGGGTTGGCCTGGA
AAATGGTACCTCCTGTCCTAGCATCTAAGAAGGTCCAGAGCTAAGAGGCG
CAAGCAGCAAGAGAAGTGTACCCTACCTCACTCAGGGTGCCAAAGCCACT
GAGAAGGAGCTCAGGGTACCCACGTATACCTGAACACCGAGCACACGGGT
ATGAGCTACACAGATTCTGTGTCAAACGCTTGGGGGTACGTGTAGAACAA
CTGCAGTGTAGTCAGCCCAAAATGCAAACCTCGCTCGTTAGCTTCTACTT
TACCTGACAGCCTTCCTCCCACGGTGCTATAGCAAGCTTAGGGTGAACTT
GGTGCCAAAAACGTACTCCTTTTCTCACACAAGAGCCAGGTTGGAATGTA
GAAATGTAAAAATCCAGCAGGCTTCTAAGGGGTGACTCCTGGTACCACTA
GAGAGAAGAATGTGGTTTAGATTGGAGCAGACTGGCCCTGTCTCTGGCAT
GTGACCTTAGCAGAGCACTTTTTTCTATATCCATAAGCTTCTTCCACGC

Query= MSMg01no301_h04.g1 MSMg01no301_h04.g1 CHROMAT_FILE:
MSMg01no301_h04.g1 PHD_FILE: MSMg01no301_h04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:51 2005
         (634 letters)



>mm_chr7_139663125_139664155
          Length = 1031

 Score = 1145 bits (592), Expect = 0.0
 Identities = 623/634 (98%), Gaps = 4/634 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaaggtgaaatgactccccccagacagaccttgcctggtcttgtttcctccaatcaagtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 aaaggtgaaatgactccccccagacagaccttgcctggtcttgtttcctccaatcaagtt 261

                                                                       
Query: 61  actgatggagatttttttaaaaaaataaaaataaaaggagacaggccaagctgggacctc 120
           |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 262 actgatggagattttttttaaaaa-taaaaataaaaggagacaggccaagctgggacctc 320

                                                                       
Query: 121 ctcatgggtcagagtctgggagcctccctcgagggcagaaatcagaggtgggttggcctg 180
           ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcatgggtcag--tctgggagcctccctcgagggcagaaatcagaggtgggttggcctg 378

                                                                       
Query: 181 gaaaatggtacctcctgtcctagcatctaagaaggtccagagctaagaggcgcaagcagc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gaaaatggtacctcctgtcctagcatctaagaaggtccagagctaagaggcgcaagcagc 438

                                                                       
Query: 241 aagagaagtgtaccctacctcactcagggtgccaaagccactgagaaggagctcagggta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aagagaagtgtaccctacctcactcagggtgccaaagccactgagaaggagctcagggta 498

                                                                       
Query: 301 cccacgtatacctgaacaccgagcacacgggtatgagctacacagattctgtgtcaaacg 360
           ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 499 cccacatatacctgaacaccgagcacacgggtatgagctacacagattcggtgtcaaacg 558

                                                                       
Query: 361 cttgggggtacgtgtagaacaactgcagtgtagtcagcccaaaatgcaaacctcgctcgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 559 cttgggggtacgtgtagaacaactgcagtgtagtcagcccaaaatgcaaacctcgatcgt 618

                                                                       
Query: 421 tagcttctactttacctgacagccttcctcccacggtgctatagcaagcttagggtgaac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tagcttctactttacctgacagccttcctcccacggtgctatagcaagcttagggtgaac 678

                                                                       
Query: 481 ttggtgccaaaaacgtactccttttctcacacaagagccaggttggaatgtagaaatgta 540
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 679 ttggtgccaaaaacgtactccttttctcacacaagagccaggttggaatgtagaaacgta 738

                                                                       
Query: 541 aaaatccagcaggcttctaaggggtgactcctggtaccactagagagaagaatgtggttt 600
           ||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||
Sbjct: 739 aaaatccagcaggcttctaaggg-tgactcctggtaccactagatagaagaatggggttt 797

                                             
Query: 601 agattggagcagactggccctgtctctggcatgt 634
           ||||||||||||||||||||||||||||||||||
Sbjct: 798 agattggagcagactggccctgtctctggcatgt 831


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1031
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1021
Effective search space:   637104
Effective search space used:   637104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)