Query= MSMg01no301_h15.b1 MSMg01no301_h15.b1 CHROMAT_FILE:
MSMg01no301_h15.b1 PHD_FILE: MSMg01no301_h15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:53 2005
(318 letters)
>mm_chr7_48827271_48827991
Length = 721
Score = 547 bits (283), Expect = e-160
Identities = 307/317 (96%), Gaps = 5/317 (1%)
Strand = Plus / Minus
Query: 4 ggaattcatgtttcctctgggggggaaaaagacttaaagttattcttgaatggtgggtgt 63
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 519 ggaattcatgtttcctct-gggggaaaaaagacttaaagttattcttgaatggtgggtgt 461
Query: 64 ggaacacagaaaatttgatgttgttttcctgttgatatattcttctgttcttttacgttc 123
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ggaagacagaaaatttgatgttgttttcctgttgatatattcttctgttcttttacgttc 401
Query: 124 tatgtgttggggtaatgacatcagcctttgtttccttacttgggtttctgagtaatgttt 183
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 400 tatgtgttggggtaatgacatcggcctttgtttccttgcttgggtttctgagtaatgttt 341
Query: 184 atttctttctttacacttaaataaatgacatcgcctttgtttccttacttgggtttctga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 atttctttctttacacttaaataaatgacatcgcctttgtttccttacttgggtttctga 281
Query: 244 gtaacgttt----ctttctttacacttaaatactgcttccagtaggttgtattgggttga 299
||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 280 gtaacgtttatttctttctttacacttaaatactccttccagtaggttgtattgggttga 221
Query: 300 tttgatttgatagttat 316
|||||||||||||||||
Sbjct: 220 tttgatttgatagttat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 721
Length adjustment: 9
Effective length of query: 309
Effective length of database: 712
Effective search space: 220008
Effective search space used: 220008
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no301_h15.g1 MSMg01no301_h15.g1 CHROMAT_FILE:
MSMg01no301_h15.g1 PHD_FILE: MSMg01no301_h15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:53 2005
(648 letters)
>mm_chr7_48652000_48653046
Length = 1047
Score = 1236 bits (639), Expect = 0.0
Identities = 644/646 (99%), Gaps = 1/646 (0%)
Strand = Plus / Plus
Query: 1 actggatttaagattaggtttgtgctttttctcagggtactgaaatcccgttgtgaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actggatttaagattaggtttgtgctttttctcagggtactgaaatcccgttgtgaaaac 260
Query: 61 ctgaatgagtgacttgatctgtgaaagatggaccaagaaaatccactatggatacaactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgaatgagtgacttgatctgtgaaagatggaccaagaaaatccactatggatacaactg 320
Query: 121 ctaaacctaaagaatagaaattgaatgggggtgattgagtcatgaagccatgaacaagag 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctaaacctaa-gaatagaaattgaatgggggtgattgagtcatgaagccatgaacaagag 379
Query: 181 actctctaccaagagtgaatcagctgtagaaaccagtgactgagagaaaagcattgataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 actctctaccaagagtgaatcagctgtagaaaccagtgactgagagaaaagcattgataa 439
Query: 241 aatctcagagagagggtttgacttcgaggttgctggtccttgctatgttttctcttttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aatctcagagagagggtttgacttcgaggttgctggtccttgctatgttttctcttttga 499
Query: 301 atgcatatgttactactactactcatattgtttcctaggcaaagatggtttcacaaacac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atgcatatgttactactactactcatattgtttcctaggcaaagatggtttcacaaacac 559
Query: 361 ttgatgaatatatattcatgccttccatgatgaaaaattaactattaactaaatttgcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttgatgaatatatattcatgccttccatgatgaaaaattaactattaactaaatttgcat 619
Query: 421 gaattatcctttattgctgcacaaaagctaatgaaggtttttcttaattgtttttgtctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gaattatcctttattgctgcacaaaagctaatgaaggtttttcttaattgtttttgtctc 679
Query: 481 taattggattcataaatgtggtccttataaatgtctctagaatgttttgttggttatact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 taattggattcataaatgtggtccttataaatgtctctagaatgttttgttggttatact 739
Query: 541 ggagagcattatagccctgattgctttgattctccatgtatgctttanagtttgaattgc 600
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 740 ggagagcattatagccctgattgctttgattctccatgtatgctttaaagtttgaattgc 799
Query: 601 aatgaaataaaaatatttcaaagaagtggaactgtgctgaatcctg 646
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 aatgaaataaaaatatttcaaagaagtggaactgtgctgaatcctg 845
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1047
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1037
Effective search space: 661606
Effective search space used: 661606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
